Musa acuminata (dessert banana): 135614828
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Entry
135614828 CDS
T03447
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135614828
03015 mRNA surveillance pathway
135614828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135614828
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135614828
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135614828
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
135614828
NCBI-ProteinID:
XP_064968664
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Position
BXJ2-6:complement(11446459..11452679)
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AA seq
499 aa
AA seq
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MADSAAPPAKAEEKRSWADEESDEEQEAAAPPSQAADEAQPSELKKIESLSISDVKDGGD
RAPEDSDGGGRLLDDPDDSDIKAVTSGETVYNSAVAFEDLKLSDELIKGLYVEMGFSRPS
KIQAITLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPRKKIPQAICICPTRELAQ
QNHAVLLKMGKYTGITSMCAIPSDSANYIPINKRPPVTDQVVIGTPGTIKKWTSARKLST
RDVKILVFDEADHMLAEDGFRDDSERIMKEIQRSSGGCQVLLFSATFDEAVKAFVSRVIK
DGNQIFVKKEELTLEKVKQYKVQCPDELAKVEVIKDKIFEFGQKVGQTIIFVRTRNSARM
LHQSLTEDGYECTSVQGALKQEDRDLIIKEFKAGLTKVLITTDLLARGFDQRQVNLVINY
DLPVKHENPSEPDCELYLHRVGRTGRFGSKGAVFNFLCTDRDRSVMEKIERHFQHHIPEI
PNWRSEEDFESALKDAGLL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagcgctgcgccgccagcgaaggcggaggagaagcggtcgtgggccgacgaa
gagtccgacgaagagcaggaagcggccgcgccgccatcgcaggccgctgacgaagcccag
ccgtccgagctgaagaagatcgagtcgctttccatctccgacgtgaaggatgggggcgac
cgggcgccggaagattccgacggtggcggccgtctgctggatgatcccgacgattccgat
atcaaagctgttacatccggtgaaactgtgtataactctgccgtggcgtttgaggacttg
aaattatctgatgagctcatcaaagggttatatgtcgagatgggctttagtaggcctagc
aagatacaggctattactctacctatgattcttacgcctccatacaaagatctggtagct
caagctcacaatggctcggggaagacgacatgttttgtgcttggaatgttgagcagagtt
gatccgaggaagaagattccacaggccatctgcatctgccctaccagagagctggctcag
cagaatcatgcggtccttttgaagatgggaaaatatactggcataacttcaatgtgcgct
attccgtctgattctgctaattacatcccaataaataagcgcccaccggtaaccgaccaa
gtggtgattggcactccgggaaccatcaagaagtggacatcggcaagaaagttgagcaca
agggacgtgaagatacttgtttttgatgaggcagaccatatgctggctgaggacggcttt
agggatgattctgaaaggattatgaaagagattcaaagaagcagtggtggctgtcaggtg
cttcttttttctgctaccttcgatgaagctgtcaaggcatttgtatcaagggtaattaaa
gatggaaatcaaatatttgtgaagaaggaggaactcacattggaaaaagtaaagcagtat
aaggtccaatgtccagatgaacttgccaaagtggaagtaataaaggacaaaatttttgaa
tttggacaaaaagtaggccagacaattatatttgtccgtacaaggaatagtgctcgcatg
ttacaccaatcattgactgaagatggttatgaatgcacatcagttcaaggtgctctcaag
caagaagacagggacctaattataaaggaatttaaagctggattaaccaaagttcttatc
acgactgatctccttgctagaggatttgatcaaagacaggttaatttggttatcaactat
gatcttccggtaaagcatgagaatccgtcagagccagattgtgaactatacctacacaga
gttggtagaactggtcgcttcggtagcaagggtgccgtcttcaacttcttgtgcactgat
agggacagatctgtcatggagaaaattgagcgtcacttccagcatcatattcctgagatc
cctaactggaggagtgaggaagatttcgagtctgctctgaaggatgccggtctgttatag
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