Musa acuminata (dessert banana): 135615165
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Entry
135615165 CDS
T03447
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135615165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
135615165
03036 Chromosome and associated proteins [BR:
mus03036
]
135615165
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135615165
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135615165
PBAF complex
135615165
GBAF(ncBAF) complex
135615165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Mesothelin
Motif
Other DBs
NCBI-GeneID:
135615165
NCBI-ProteinID:
XP_064969371
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Position
BXJ2-6:complement(18823839..18825967)
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AA seq
517 aa
AA seq
DB search
MASNSNNQPRAVGGSPSLANSGMGLPASANPPSHLRPPPAPGPSPFQGLFHSQTQSQAQP
QVHSPFQIHMGSQSHLGPLGSSSPSFSTPGAKRPPQKPPARPPVPIPAAGSPSIKTADIT
AAARRKKRKLPEKQLPDRVAALLPESALYTQLLEFEARVDAALARKKIDIQEALKSPPSM
QRTLRIYVFNTFANQTRTIPEPKNAEPPSWSLKIVGRILEDGVDPDPVGGLPKPNPIYPK
FSSFFKRVTIALDPSLYPENPTILWEQARLPAAHDGFEIKRMGDKEFTASIRLEMNYNPE
KFRLSPPLIEVLGIEVDTRARIIAGIWQYVKAKKLQNPTDPSYFACDPPLKKVFGEDKMK
FAMVSQKISPHLSPPQPIHLEHKIRLSGNGAVGNACYDVLVDVPFPLQKEMSVFLANTEK
HRDIEACEEVICASIKKIHEHRRRRAFFLGFSQSPVEFINALIASQGRDLKLIAGEANRN
AERERRSDFYNQPWVEDAVIRYLNRKPVTGNDAPGST
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaacagcaacaaccagccgcgcgccgtcggcggatcgccgtctctcgccaac
tcgggaatgggcttgccagcgtcagctaacccgccgtcccatctccgtcccccgccggcg
cctgggccgtctcctttccagggtctctttcactcgcaaacgcaatcccaagcccagccg
caggtccactcccccttccagatccatatgggttctcagtcccatctcggcccccttggg
tcgtcatccccctccttctcgacccccggcgccaagcggccccctcagaagcccccagct
aggcccccggtccccatccctgctgccggcagcccaagcatcaagaccgctgatataact
gccgctgcccggagaaagaagcgcaagcttccagagaagcagctgcctgaccgagttgca
gccctcttgcccgagtccgccctctacactcagttgctcgagtttgaagcgcgggttgat
gcggccctcgcaaggaagaagatcgacatacaagaagctctgaaaagccctccttccatg
cagagaacccttaggatttatgtcttcaataccttcgccaaccaaacacgcactattcct
gagcccaagaatgcagagcctccctcatggtctctgaagattgttgggaggatcttggag
gacggtgttgaccccgatcctgttggtgggctgcctaagcccaaccccatatacccgaag
ttctcatcattctttaaaagggttacgatcgcgttggacccatctctgtacccagagaac
ccaacgatcttgtgggagcaagcacgattgccagcagcacatgatggctttgagatcaag
cggatgggagataaggagttcactgctagtataaggcttgagatgaattataatcctgaa
aagttcagattatcccctccactgatagaggtgcttggaatagaggttgatacacgagct
agaattatagctgggatatggcagtatgtgaaggcaaagaaattgcagaaccctactgat
ccctcgtattttgcttgtgatccacctttgaagaaggtatttggagaagacaagatgaag
tttgctatggtgtcacagaagatctcaccgcatctatctcctccacaacccattcatttg
gagcataagattaggctttcaggaaatggtgccgtgggcaatgcttgctatgatgtgcta
gttgatgttccatttcctctgcagaaggagatgtcagtcttccttgctaacacagagaaa
cacagagatatcgaggcttgtgaggaagtgatatgtgcttccattaagaagattcatgag
caccggaggagaagggctttctttcttggcttcagtcagtctcctgtggagtttataaat
gctttgattgcttcacagggtagggacttaaaacttatagcgggtgaagcaaaccgaaac
gctgagagggaacgccgttctgacttctataaccaaccatgggttgaagatgctgtcata
cgctatctcaaccgcaaacctgtaaccggtaatgatgctcctggtagcacatga
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integrated database retrieval system
