Musa acuminata (dessert banana): 135615243
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Entry
135615243 CDS
T03447
Name
(RefSeq) nuclear pore complex protein NUP85-like isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135615243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135615243
03036 Chromosome and associated proteins [BR:
mus03036
]
135615243
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135615243
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135615243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
135615243
NCBI-ProteinID:
XP_064969552
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Position
BXJ2-6:complement(30685831..30697003)
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AA seq
719 aa
AA seq
DB search
MPGRPSDPGSEAVVPFSPEFRDPVVYPVHHGVRPPLLRVYVAWSRGSLLHVACLRQPSPE
PEPEDSVDEGEAGGKVVEVRLRAGEEGISEAQRRRIAYGSVPAFALLQSRKNSLMAMSRM
SSSLLRGEWWQYVLEYSKNISELLGTRRLSSNMVIEDPRMVVQPSEEPTSLKAAWELMEI
FYVDKQSLTWLPERLVDWSEDYDSLVTRTELTIHSKLVNMQKKLANMKVVEDDPDYWEGM
SSALAVGWLDIVVKLLRFHGSYQLDQLDNRETENGLVEAVAVLVSTMPRLRPDPSSGKLG
QFCKTRPDFIKAWEKWRGHLSKLECSAFWVQCSHDQTREGLQKLLKIMLGDITNITSATC
HWMELLVSHLLYIRQFMAGLEGLNNLAHKCRQLKPTVHYNGLMSLLIGILEESPEVVLAE
CSKTFGPWMVAHGIELLTAGSDHADVLLHEERYNLGGISIEELHWLVYAQILSSHPLTCQ
IAPTYLASCPKQGIGLLEILLYKQPIQHHQVILKNLEICRLYELDNISVNVLKTAGMYNW
KHGRRGFGIYWLQLARDEVRLNRIAQQLFKCIGKSLSDDSFKQWEGLLELLGTQVGSSGG
LEFLHKYRDFKRTLKQVEDGRASNAARQAAESLIQLMRSPSTPQQFWLPLLHDSVKLLNW
KAHPLLSVSETNLLLNKLQDLSMGKLRPDFVAADLPPSALSSIRLALATNLGRAILEEC
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccagggcggccgtcggatcctggcagcgaagccgtcgtcccattctcgccggagttc
cgggaccccgtggtctatcccgtccaccacggcgtccggccccccctcctccgcgtgtac
gtcgcatggtcccgcggcagcctcctccacgtggcctgccttcgccaaccctctcccgaa
ccggaacccgaagactccgtcgacgaaggggaggccggcgggaaggtggtggaagtgagg
ctcagagctggcgaagagggtatcagcgaggcccagaggcggaggatcgcctatggatcc
gtccctgcctttgcgctgctccagagcaggaagaattcgctcatggcgatgtctaggatg
tcatcctctttacttcgcggtgaatggtggcaatatgttttggagtatagtaaaaacata
agtgagcttctgggaactcgtcggctttcttctaacatggtgattgaagacccaaggatg
gttgtgcagccttctgaggaacccaccagtttgaaggctgcctgggagctgatggagatt
ttttatgttgataaacaatcattaacatggcttccagagcgtcttgtggattggtcagaa
gactatgacagcctagtgaccaggacagagctcacaattcattcaaagcttgtgaatatg
caaaagaaacttgctaatatgaaggtagttgaggatgatcctgactattgggaaggaatg
tcatcagcacttgcagttggttggcttgacatcgtggtgaaattgttaagattccatgga
tcttatcagttggatcaacttgacaatcgtgagacagaaaatgggttagtagaggccgtt
gctgttcttgtctctacaatgccacgtttacgtcctgatccatcttctgggaaattaggt
caattttgtaaaactagaccagattttatcaaggcttgggagaaatggcgaggccacttg
agtaagctagaatgttctgcattttgggttcagtgcagccatgaccaaactcgtgaaggc
cttcagaagttgttaaagatcatgctgggagacattaccaatattacttctgcaacttgt
cactggatggagcttcttgtttctcacttgctatacattagacaattcatggcgggttta
gaagggcttaacaacttggctcataaatgtaggcagttgaagccaactgttcattataat
gggctaatgagtcttctaattggtattcttgaagaaagccctgaggttgtattagcagaa
tgctcaaagacatttggtccgtggatggttgcccatggaatagagttgttgacagctggc
agcgatcatgctgacgttctgttgcacgaagagagatataacttgggaggtatcagcata
gaggaactccactggcttgtatatgctcaaattctttcttcacatcctttgacttgtcaa
attgcaccaacgtatctggcatcatgcccgaagcaagggataggtttgttagagatttta
ctgtataagcagcctattcagcatcatcaagtcattctaaagaatcttgagatttgtcgc
ttatatgaacttgataacatcagtgtgaatgttttgaagactgctggtatgtacaactgg
aagcatggtaggagaggatttggaatttactggcttcaactagctcgtgatgaagtacgg
ctcaacagaattgctcaacaactttttaaatgtatagggaaatcgttgtctgatgacagc
ttcaagcaatgggagggattacttgaactgcttggtacacaagtagggagttcaggaggc
ctggagtttcttcataaatatcgagactttaagagaacccttaagcaggtggaagatgga
agagcttctaatgctgctcgacaagctgcagaatcactcatacagctgatgagaagtcca
tccactccacaacaattctggcttcctcttttgcatgattcagtgaagttgctaaattgg
aaggctcacccactgttgagtgtctcggaaacaaacctgttgctgaataagctacaagat
ttatccatgggaaagctgcgtccagatttcgtcgctgctgacctgccgcccagtgccctg
agttccatcagactagccctcgccaccaatcttgggcgtgctattctcgaagaatgctga
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