Musa acuminata (dessert banana): 135615318
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Entry
135615318 CDS
T03447
Name
(RefSeq) zinc finger CCCH domain-containing protein 27-like
KO
K13192
RNA-binding protein 26
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mus01009
]
135615318
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135615318
03041 Spliceosome [BR:
mus03041
]
135615318
Protein phosphatases and associated proteins [BR:
mus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135615318
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
135615318
Spliceosome [BR:
mus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135615318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glutaredoxin
RRM_1
Nup35_RRM_2
RRM_Nup35
PHM7_cyt
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
135615318
NCBI-ProteinID:
XP_064969690
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All DBs
Position
BXJ2-6:complement(33752386..33784869)
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AA seq
1081 aa
AA seq
DB search
MALAKAKEIVSSAPVVVFSKTNCGHSKWVKELLTQLGVFFKVIELDLESDGSDVQSALTE
WTTQRKLPIVFIGGNHIGGDESTRNFFTRMLQALEDASIVSVGQNLDIIKKFELSLPPAA
DNGQLRTQMPSEINHSMSSKPLIDSEDREVSDDDDDRNHKHRRREAHPNMSDNDVQELSM
RQTNRKRNKPFESRKMFHDNINNINMERDASSKFEKRRPIFTPGMRVSSDFSSRARTNQT
YTGPCFDKSTSTGRPPVGRGRGRSTISRSLQDSRFNPFDTHDFASQVVSQGLPTHPSLFV
GTGIPAAASSQNACWGTYGFVPGMNSRILDPLQPLGLQGALQSTITPLFNMGMPRLRCRD
FDEQGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSDPNSHALGIQAGPGSLPSVRAP
SGLVTGGNLIPAKDGKTILSDDPLKLSGVSSACGAAEADVYDPDQPLWNNECPETSGTGF
PLLSNDEPLWNADSSSQQSLTLSNGFKSDQASRVFMENIGSQSTNSSIWGRIGRGSRSEM
GIKTSSNVASISHLSDATKEDNEKSMVNTSVIPEKRIPAEDMGYKTTELQPLSRLHVDSG
RNSGRMSQKASRTLYVHGIPQKNNTREALLSHFQKFGEVVDIYIPLNSEKAFVQFSKREE
AEAALEAPDAVMGNRFIKLWWANRDRVYDVRKNNVCTKLPPSSSKGGSSFPSCPSGHDKE
KEDLNSPVPTGRKTPASELLVAVPGLKISSPHSLKIASPVPKKLEGLELLKEELRKKQEI
LAQKRDEFRRQLDKFEKQAITVKKGEVASGQTSKKLKVDIGNEAAKAGTPRAPITPAGGR
QEVENTGQTRKSKEVLVSPTTIANAANFQNSNTEETSHLTNPDNQSTSFRVLPPLPADFT
DVAVLQDHFSVFGDLTSVVLEEPEERSENDAVKTPENCCARVTFISCDNAKRAYVGGKCW
QGHNLHLMWLSDSGNSNRACGSQEIMGFLGGSSAYIRDDPMTSVISSPVEESSADVAISG
VTAVMDVSSSRGLEDVHCDDNGVLMVPLRTSHPNPNTLSCEDHPGLDVPVVKDKMGVDLA
Q
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgcgaaggctaaggagatcgtttcctccgcccccgtcgtcgtcttcagcaag
acaaactgtggacactccaagtgggtaaaggagttgctcacacaattaggagtgtttttt
aaagtgattgagttggatctcgaaagtgatggatctgatgtacaatctgcactaacagaa
tggactactcaaaggaaattgccaattgtattcattggtggaaatcatattggtggtgat
gaaagtacaagaaactttttcacaaggatgttacaggcccttgaagatgcttcaatagtg
agcgttggtcagaaccttgatattattaagaagtttgagctgtctttgcctcctgctgcc
gataatggacaactgagaactcaaatgcctagtgagataaatcattcaatgtcttctaaa
ccacttattgattctgaagaccgagaagttagtgatgatgatgatgatcgcaaccataaa
catcgtaggagggaggcacatcctaatatgtctgataatgatgttcaagaactatctatg
cggcagactaatagaaaaagaaacaagccttttgagagtaggaaaatgttccatgacaat
attaacaacatcaatatggagagagatgcttcctcaaagtttgagaagcgacgacctatc
ttcacaccaggaatgcgggtttcctctgattttagttcacgggctaggacaaatcaaaca
tacactggtccctgctttgataaatccacatctacaggacgccctccagtaggaagagga
agagggaggagcactatttcccggagcctacaagattccagatttaacccctttgacaca
catgattttgcatcacaggttgtttcacaaggactgcctacgcaccctagcctttttgtt
ggtacaggtatacccgctgctgcaagttcacaaaatgcatgttggggtacatatgggttt
gttcctgggatgaacagtagaattttggatccactccaaccacttggtcttcaaggggct
cttcagtccacaatcacaccattattcaatatgggcatgcctcgtctgcgttgcagagac
tttgatgaacagggattttgcctgagaggggatatgtgtccaatggagcatggtgtaaat
cggattgttgttgaagatgtgcagagtctttctcagttcaatcttcctgtctcggatcca
aattcacatgctctgggaattcaagctgggccaggatcgttgccttctgttagggcacct
tcaggcctcgtcacaggcggcaacttgatacctgcaaaagatgggaaaaccatcttgtct
gatgatccattaaagctgagtggagtttcatctgcttgtggtgcagctgaagcagatgta
tatgatcctgatcagcctttatggaacaacgagtgtccagaaacatctggcacaggcttt
cctttactgagcaatgatgaacctttatggaatgcagactcttcttctcagcagagtctc
acattatctaatggctttaaaagtgatcaggcaagcagagtcttcatggaaaatattggt
tcacagagtactaattcatctatttggggccggattggccgtggtagtaggtcagagatg
ggtataaagactagtagcaatgtggcttctataagtcatctgtcggatgcaacgaaagaa
gataatgagaaatctatggttaatacttctgtcattccagaaaaacgtattcctgctgag
gacatgggttacaaaacaacagagttgcagcctctttcaagattgcatgtggactctggt
cgtaacagtggtagaatgtctcaaaaagcttcacggactctctatgtacatggtattcct
caaaagaacaacacaagggaggctcttctttcacacttccagaagtttggtgaagttgtt
gatatctatattccactgaatagtgaaaaagcttttgttcaattttctaaaagggaagag
gctgaagctgcccttgaagcacctgatgctgtaatgggtaaccgttttataaaactatgg
tgggccaaccgtgatagagtttatgatgttcgaaaaaataatgtttgcactaagttgcct
ccatcatcttccaaggggggatcttcttttccatcttgtccatctggacatgacaaagag
aaagaagatctgaactctccagttccaactggaagaaaaacacctgcttctgaactgttg
gtggcagtcccaggtctgaaaatttcatctccacattctctaaaaatagcttctccagtg
ccaaagaaactagagggattggagctcttgaaagaggaacttcgcaaaaagcaggaaatt
ttggcccaaaagcgcgatgaattccgtcgccaattagacaaatttgagaaacaagctatt
acagttaagaagggtgaagtagcctctggacaaacatctaaaaagcttaaagtggatatt
ggcaatgaagcagcaaaagctggaacacccagagcaccaattactcctgcaggcggacga
caagaagttgagaatacaggacaaactagaaagtccaaggaggttcttgtttcacctact
acgatagcaaatgcagcaaattttcagaattccaacacagaagagacaagtcatctgact
aatccagataatcagtccacttcatttagagttcttcctcctctgccagctgatttcaca
gatgttgctgttctgcaggatcatttctcagtatttggtgatcttacttcagtagtacta
gaagagccagaagaaagaagtgagaatgatgcagtgaagacacctgaaaattgttgtgct
cgtgtaacttttatctcatgtgataatgcaaagagagcttatgttggtggtaaatgttgg
caagggcataatctgcaccttatgtggctgagtgactctggtaactctaacagagcttgt
ggcagtcaagaaattatgggattcctgggtggttcaagtgcttacatccgagatgaccca
atgacatctgtaatatcgtcaccagttgaagaaagttcagcagatgttgctatttctggg
gtaactgctgttatggacgtctcatcttctaggggcttggaggatgtacattgtgatgac
aatggtgtgctcatggttcccttaaggacatcccatcctaatcccaatacattgtcatgc
gaggatcaccctgggcttgatgttccagttgtcaaagacaaaatgggtgttgatcttgca
cagtga
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