Musa acuminata (dessert banana): 135615545
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Entry
135615545 CDS
T03447
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus00040
Pentose and glucuronate interconversions
mus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
135615545
Enzymes [BR:
mus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
135615545
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
135615545
NCBI-ProteinID:
XP_064970264
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Position
BXJ2-6:complement(39407523..39409575)
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AA seq
407 aa
AA seq
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MAAFLFFLTIAAFTAPIYSSRAPLTSAAVRDPELVVQEVQRSLNVSRRRLGYLSCGTGNP
IDDCWRCDPDWADNRQRLADCAIGFGKNAIGGRDGEIYVVTDSGDDDPVNPKPGTLRYAV
IQEEPLWIIFKRDMVIQLKEELIMNSHKTIDGRGASVHISGGPCITIQYVTNIIIHGVHI
HDCKQGGNAYVRDSPGHYGWRTVSDGDGVSIFGGSHVWVDHCTLSNCHDGLIDAIHGSTA
ITISNNYLSHHDKVMLLGHSDELTSDKSMQVTIAFNHFGEDLVQRMPRCRHGYFHVVNND
YTHWEMYAIGGSAAPTINSQGNRFLAPNDRFAKEVTKREDAQESEWKKWNWRSEGDQMLN
GAFFTPSGAGASSSYAKASSLGARSSSLVGTITVSAGVLSCKKGSRC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcagcattcttgttcttcctcaccatcgcagccttcactgcccccatctactcttct
cgtgcacccttaacgtcggcagctgtccgcgaccctgaattagtagtacaggaagtacaa
agaagcttgaacgtgtcgcggcggcgactgggctacttgtcatgcggcaccggcaatccg
atcgacgactgctggcggtgcgaccctgactgggctgacaaccggcagcggctcgcggac
tgcgccatcgggttcgggaagaacgcgattgggggcagggacggcgagatatacgtggtg
accgacagtggcgacgacgaccccgtcaatccgaagccgggcacgctccggtacgccgtc
atccaggaggagccgctgtggatcatcttcaagcgcgacatggtcatccagctgaaggag
gagctcatcatgaactcccacaagaccatcgacggccggggcgccagcgtccacatctcc
ggcgggccgtgcatcaccatccagtacgtcaccaacatcatcatccacggcgtccacatc
cacgactgcaagcagggcgggaacgcgtacgtgcgcgactccccagggcactacgggtgg
cgcacggtgtcggacggcgacggggtgtccatcttcggcggcagccacgtctgggtcgac
cactgcacgctgtccaactgccacgacggcctcatcgacgccattcatggatccaccgcg
atcaccatttccaacaactacttgagccaccatgacaaggtcatgctgctgggtcacagc
gacgagttgacgtccgacaagagcatgcaggtcaccatagccttcaaccacttcggggaa
gacctggttcagaggatgccaaggtgtcggcatggctatttccacgtggtgaacaatgac
tacacccactgggagatgtacgcaattggtgggagtgctgctcccactataaacagccaa
ggcaacagatttcttgcgcccaatgatcggtttgcaaaagaggtgactaaacgcgaggac
gcacaggagagcgagtggaagaagtggaactggaggtcggaaggggaccagatgctgaac
ggagccttcttcacgccgtccggggccggagcttcgtcgagctacgcgaaggcgtcgagc
ttgggggccaggtcgtcgtctctcgtcgggaccatcaccgtctctgccggcgttctctcg
tgcaagaagggatcccgctgttga
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