Musa acuminata (dessert banana): 135615798
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Entry
135615798 CDS
T03447
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03030
DNA replication
mus03420
Nucleotide excision repair
mus03430
Mismatch repair
mus03440
Homologous recombination
mus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135615798
03420 Nucleotide excision repair
135615798
03430 Mismatch repair
135615798
03440 Homologous recombination
135615798
03460 Fanconi anemia pathway
135615798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mus03000
]
135615798
03032 DNA replication proteins [BR:
mus03032
]
135615798
03400 DNA repair and recombination proteins [BR:
mus03400
]
135615798
Transcription factors [BR:
mus03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
135615798
DNA replication proteins [BR:
mus03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
135615798
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
135615798
MMR (mismatch excision repair)
135615798
DSBR (double strand breaks repair)
HR (homologous recombination)
135615798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
DUF223
OB_MEIOB_N
zf-CCHC_2
zf-CCHC_3
zf-CCHC_4
CDC24_OB3
Hormone_4
Motif
Other DBs
NCBI-GeneID:
135615798
NCBI-ProteinID:
XP_064970845
LinkDB
All DBs
Position
BXJ2-6:complement(43349294..43353169)
Genome browser
AA seq
882 aa
AA seq
DB search
MAAVDLTQGAIAAISEGRAEEGARPVVQVWDVKLVNTQQSTTERYRMLLSDGTHMQQAML
ATQMNGLVKSGALQKYSIVQLNEFICNVIQNRRIIIVINLEVLVSSSNGIGEPKLYDNGP
ASQNRAPIPAQPSSTDQPVKAAVNPQTYGGPNSSKSNSGQNVAGVSLNPKSESMTNNSSF
GGSYGSGPMSSRNMNSPNIEQPKAEQGIGRFYESHPNSGNQNQRFSNPASVGAFGPPASS
YGRPVQPAYQQPPPLYTNRGPIAKNEAPARIIPISALNPYQGRWTIKARVTTKSELRRYN
NPRGEGKVFSFDLLDSDGGEIRVTCFNVVADQFYDQIEVGKVYLISKGSLKPAQKSFNHL
NNEYEIFLEAQSVIQPCLEEDNTIPKQQFNFRPINEIEGLENNTMVDVIGIVVSINPSLS
IMRKNGTETNKQTLQLKDMSGRIVEMTMWGKFCSVEGQQLQHMCDSGVCPVLAIKTGRVS
DFNGKSVTTIGSSQLFINPDFPEAHRLRDWYNREGKSMTAASISRETTTTGRNDVRKTVA
QIKDEGLGRSEKPDWITVKATITFMKVDNFCYTACPLMVGDRPCNKKVNNNGDGTWHCDR
CDQSFPECDYRYLLQFQIQDHTGMTWVTAFQECGEEILGVTAKELYLLKYEEQDDLKFAE
IIRTVLFHQYLFKLKVKEETFSDEQRVKSTVVKAEKINPSSESKYLLGLIEKLSSEDPNA
SKGTYGTSASTSGMANITYGTGESNFGSNSNNFGNIHSGRNNFGNNSSSDGYRMGATNQF
VQHANDYGGNMKHSFSRNEVQAFCNNCGSNGHSFQNCPRGVNRQGQSAGGGFSSIGSNIC
FKCQQPGHWASECPGMGAAGSAYGDGGSSGRYTNTRQHVGGF
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtggatctgacgcagggggcaatagcggcgatttcggaggggcgggcggag
gagggcgccaggccggtggtgcaggtgtgggacgtgaagctggtcaacacccagcagagc
accacggagcggtaccggatgctgctgtccgacggaactcacatgcagcaggccatgctc
gcgacgcagatgaacggactcgttaagtcgggggcactgcagaagtactccatcgttcag
ctcaacgagttcatctgtaacgtcatccagaaccgcagaatcattattgttatcaacttg
gaagtccttgtcagcagtagtaatggaattggagaaccaaaattgtatgataatggtcct
gcttcacaaaaccgagctcctatccctgctcagccatccagtacagatcaaccagtgaag
gctgcggtgaatcctcaaacttatggtggtccaaattctagcaaatctaacagcggacaa
aatgttgcaggagtttctcttaatcccaagtcagagtctatgacaaacaactcatctttt
ggtggttcttatggtagtggtcccatgtcgagcaggaacatgaatagtccgaatattgaa
cagccaaaagctgaacaaggtatcgggaggttttatgaatcacatccaaacagtggtaat
caaaaccagaggttctcaaatccagcttctgttggagcatttggacctcctgctagttcc
tatgggcgtccagttcagcctgcttatcagcaacccccaccgctgtacacaaatagaggg
cctatagccaagaatgaagctcctgctcgcattattcctatttctgctttgaatccttac
cagggcagatggacaattaaggcaagagtgacaaccaagagtgaacttcggcgctacaat
aatcctaggggggaagggaaagtcttctcttttgatctcctggattcagatggtggagaa
atacgtgttacttgctttaacgtggtagccgaccagttctatgatcagattgaagtgggg
aaagtgtacttgatctccaaaggaagcttgaagcctgcacagaagagctttaatcatctg
aacaatgaatatgaaatatttttagaggctcaatcagtgatccaaccatgtttagaggaa
gataacaccatcccaaagcaacagttcaactttcggccgataaatgaaattgaaggcttg
gaaaacaataccatggttgatgttattggcattgtggtgtcaataaatccctcgctttcg
ataatgagaaaaaatggcacagaaaccaataaacaaactctccaattaaaggatatgtca
ggtcgtattgtggaaatgactatgtggggtaagttctgcagcgtagagggtcagcaactt
caacatatgtgtgactctggtgtatgtcctgtactggccattaaaactgggagagtcagt
gattttaatgggaagtcagtaactactattggctcaagccaactatttataaatcctgat
tttcccgaggctcacagattgagagactggtataatagagaagggaagagtatgactgct
gcttcaatatccagggagacaacaaccacgggtaggaatgatgttaggaagacagtcgca
cagattaaggatgagggtttaggacgatccgagaaacctgattggataaccgtaaaggca
accatcacgttcatgaaggttgacaatttctgctatacagcttgtccattgatggtaggg
gataggccatgcaataagaaggttaacaacaatggtgatggcacttggcattgtgatcgt
tgtgatcagagttttcccgagtgtgattataggtatctgctccagtttcagatccaggat
catacaggtatgacctgggttacagcattccaagaatgtggcgaggagatattgggtgtc
actgcaaaggagctgtatttgttgaaatatgaagaacaagatgatttgaagtttgcagaa
attattcggacggtgctcttccatcaatatttattcaagttgaaagttaaggaggagaca
tttagtgatgaacagcgtgtgaaatcaactgttgtcaaagctgagaaaataaacccatcg
tctgagagcaagtatcttctgggtctgattgagaagctttcgagtgaagatcccaatgct
tctaaaggaacgtatggaacttctgcctcaacttctggaatggctaatattacctatggt
actggtgaatctaactttggcagtaatagcaacaactttggcaatatccattctggaagg
aacaactttggcaataatagcagttccgacggatacagaatgggagcaacaaatcagttt
gtgcagcatgcaaatgactatggtggcaacatgaaacatagtttttctagaaatgaggtt
caagcattctgcaacaattgtggctccaatggtcacagtttccagaattgtccgagaggc
gtaaataggcagggccagtccgcaggtggtggattctcaagtattggttccaacatttgt
ttcaaatgccaacagcctgggcactgggctagtgaatgccctgggatgggtgctgccgga
tcagcatatggggatggtggttcatcaggaagatacaccaacaccaggcaacatgtcggt
ggtttctaa
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integrated database retrieval system
