KEGG   Musa acuminata (dessert banana): 135615896
Entry
135615896         CDS       T03447                                 
Name
(RefSeq) cleavage stimulation factor subunit 50-like isoform X1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    135615896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mus03019]
    135615896
Messenger RNA biogenesis [BR:mus03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     135615896
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 EIF3I Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_Aladin WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_DCAF4 eIF2A Cytochrom_D1 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_NOL10_N Beta-prop_VPS8 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 135615896
NCBI-ProteinID: XP_064971050
LinkDB
Position
BXJ2-6:complement(44285996..44295772)
AA seq 432 aa
MEASLDQTLQEGKLVRQVNAFIVAYLRDNNLHQAAMAVASATMTPLATDAPANRLLELVT
KGLAVERDEASRGVSAASAAGIPVLLGSMPVPTQAIDFSTMPETKGSSKTFPKHETRHVS
EHKNFARCARFSPDGRFVATGSSDTSIKLFEVSKMKQAVLADSRDGPVRPVIRTFYDHSQ
PINDLDFHPQSTVLISGAKDNTIKFFDFSKTVARRAFRVIQDTHNVRSVSFHPSGEYLLA
GTDHPIPHLYDINTFKCYLTANAQDLNAKAAINQVRYSSTGSMYVTASKDGSIRVWDGVT
AQCVRPIVGAHGLMEATSASFTKDQRFILSCGKDSTIKLWEVGTGRLLKQYLGAVHTQFR
CQAVFNGTEEFILSIDESSNEVVIWDALTAEKVAIWPSNHVAAPRWIEHSPTEAAFVTCG
NDRSVRFWKEIP
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggaagcgagcctggatcagacgcttcaggagggtaagctcgtccgtcaggtcaacgcc
ttcatcgttgcctatcttcgtgacaacaatctgcatcaggctgcaatggcggttgcttca
gccacgatgaccccgttggccacagacgcacctgcaaacaggcttcttgaactggttact
aagggtcttgcagttgagagggacgaggcttcaaggggagtttcagctgcgtctgctgca
gggataccggttttacttggctcgatgcctgttccaacccaagccatagatttcagtacc
atgcctgagacaaaaggttcatccaagactttcccaaagcatgagacaagacatgtttcg
gagcataagaattttgctagatgtgcaaggtttagtcctgatgggcgatttgttgcaact
ggaagttcagacacatctattaagctatttgaggtttcgaaaatgaagcaagcggtgctt
gcagattccagggatggtccagtgaggcctgttattcggacattctatgatcattcacag
ccaattaatgatctagatttccatccacaaagtacagtattaatatcaggggcaaaggac
aacacaataaagttttttgatttctccaaaacagttgcaaggagagcctttagagttatc
caggacactcacaatgtgagatctgtttcttttcatccttctggggaatatctattggca
gggactgatcatccaattcctcatttgtatgatatcaatactttcaagtgttacttaaca
gcaaatgctcaggacctaaatgctaaagctgctatcaaccaggtccgatactcgtcaact
ggcagtatgtatgtgacagcatcaaaagatggttctattcgtgtatgggatggggttact
gcacaatgtgtccgacccatagttggtgcacatgggttaatggaggctacaagtgcaagt
tttacaaaagatcaaaggttcattctctcttgtggaaaggactctaccattaaattgtgg
gaagtaggcactggaagactactcaagcaatacctgggagcggtgcacacgcagtttcgt
tgtcaggctgtcttcaatggcactgaagagttcattctatccattgatgaatcaagtaat
gaggtggttatttgggatgcgctcactgctgagaaggttgcgatctggccatctaatcat
gtagctgccccccggtggatcgagcactctccgacagaggcagcctttgttacctgcggt
aatgacaggtctgtcaggttctggaaggaaatcccttga

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