Musa acuminata (dessert banana): 135616176
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Entry
135616176 CDS
T03447
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT4-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135616176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135616176
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135616176
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
135616176
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Sina_TRAF
zf-C3HC4_2
Zn_ribbon_6
zf-RING_6
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
135616176
NCBI-ProteinID:
XP_064971434
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Position
BXJ2-7:complement(11334074..11339725)
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AA seq
235 aa
AA seq
DB search
MESDNIECISVSDGMVDDDEVAHVPHPFLKPHGDGNGTVIGCAGGFPAPVISPVTRVHQL
LECPVCTNSMYPPIHQCHNGHTLCSACKSRVHNRCPTCRQELGDIRCLALEKVAESLDLP
CRYFSLGCPESFPYYSKLKHEAQSDFRPHNCTDAGSECSVVGDIPFLVAHLREEHQVDMH
VGSAFNHRYVKSNPREVENASWVLTVFHCRFMGDENEAMHCSYSLVVGSNGRKLT
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggataatatcgagtgcatctccgtgtcggacgggatggtggacgacgacgag
gtcgcccatgttccccaccccttcttgaagccccacggcgatgggaacggaactgtcatc
ggctgcgccggcggctttccggcgccggttataagcccggtgactagggtgcatcagttg
ctggagtgccccgtctgcaccaactcgatgtaccccccgatccaccagtgccacaatgga
cacaccctatgttcagcttgtaagtcaagggtacataatcgttgccccacatgtaggcaa
gagcttggagacatcagatgtctggccttggagaaagtggcggagtcactcgatcttcct
tgccgatatttttcgctggggtgccctgaaagttttccatattacagcaaactcaagcat
gaagctcaaagcgatttcaggccacacaactgcaccgatgctggttctgagtgttctgtt
gttggggatattccattcctcgttgctcatttaagggaggaacaccaggtagatatgcac
gttggttctgcattcaaccatagatatgtgaaatccaatcccagagaggttgaaaatgct
tcctgggtgttgactgtgttccactgtcgtttcatgggtgatgagaatgaagcaatgcac
tgtagctacagccttgtagttggttcaaatggcaggaaacttacgtga
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