Musa acuminata (dessert banana): 135616817
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Entry
135616817 CDS
T03447
Name
(RefSeq) E3 ubiquitin protein ligase RIN3-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135616817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135616817
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
135616817
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135616817
Multi subunit type E3
ERAD complex
135616817
LMBR1L-GP78-UBAC2 complex
135616817
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
CUE
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_2
zf-RING_11
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
135616817
NCBI-ProteinID:
XP_064972529
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Position
BXJ2-7:5341750..5355408
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AA seq
581 aa
AA seq
DB search
MAVNYLCLSAFSTAVGLVGLQWWTVSSLDRMRSDGLFVGDGHGVSSESARRALELLLSSH
VTVAMLVNFVINVYVLVVLLLKTLFFVRLNASETRKVLEGFVNYILYKGAFLLLVVPPDI
SQVIIWSSWLIFLCFLKIFQSLARDWLERLNASPSVTPLKYFRVFSALLMVLSADFLWMK
LCMIYISHSSSLFMLLFFEPLCIAFETFQAIMVHGFQLLEICQGHSNKSAADCSADSDIQ
KTAAGSLSEWKGILIRHCGFILDMFTLAMVLGHYLMTWWLHGMAFHLVDVVLFLNSRALL
SAIMKRIKTYINLWKSLSSLDGALPDASYEELCAYDDDCAICRGPMARAKKLWCNHLFHL
VCLRSWLDQGLTEMYSCPICWRPLFVSSPRGHTRSISGNGTDDLQLPEYLNLGMNLQTVP
DHASPLGASPNHQQNASDTIWRVAASDSSWAPPLANQGMAGAGTSSSVRPVGYGGVQMMM
RQLASVSENFAHGSLDNDAWTPWPSQHTSMPSLPSSSSLRMNRNATGLRIRNTSPSVNNM
SELLAMVDIVREVLPHIPDEFIVQNLLRTNNIDITVNNLMQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaattatctgtgcctctcggcgttcagcacggcagttggcctcgtcggactg
cagtggtggacggtctcctcgcttgaccggatgcgatccgatgggttgttcgttggggat
ggccatggtgtttcctcggagagtgcacgccgagcgctggagctgctcctcagctctcat
gtcactgtagctatgctggtgaattttgtgattaatgtgtacgttctggtcgtcttgctg
ctcaagacactattctttgttcggttgaatgcatcagagactagaaaagttttggaaggg
tttgtcaattacatactatacaagggagcttttcttctcctagttgtgccacctgacatt
tctcaagtcatcatatggtcaagttggttgatctttctatgtttccttaagatttttcaa
tcattagcaagagattggcttgaaagactaaatgcatctccttctgtaacacctttgaag
tacttccgtgttttctctgcattgttgatggtcctatctgctgatttcctttggatgaag
ttgtgtatgatctacatttcacacagttctagtttgtttatgctgctgttctttgagcct
ctctgtatagctttcgagacatttcaggccattatggtacatggatttcagttgcttgag
atttgtcaggggcattccaataaaagtgctgctgattgctcagcagattccgacattcaa
aaaacagcagcaggttctctgtctgaatggaaggggattcttataagacattgtggtttc
attctagatatgtttactttagcaatggtgctaggtcattacttaatgacctggtggctt
catggcatggcatttcatctagtggatgttgttcttttcctgaactcgcgtgctctttta
agtgcaataatgaagcgaatcaaaacatatatcaacttgtggaaatctcttagttccctt
gatggagcattacctgatgcttcatacgaggaactttgtgcctatgatgatgactgtgca
atatgcagaggaccaatggccagggctaaaaaactgtggtgcaatcatctattccatctt
gtgtgtttgagatcttggttggaccagggtttgactgagatgtattcttgccctatatgt
tggaggcctctttttgtttctagtcctcgaggccacacaaggtccatttctgggaatgga
acagatgacctgcaacttcctgaatatttaaatttaggaatgaacctacagacagttcct
gatcatgcgtcacctctgggagcatctccaaaccaccaacagaatgcttcagatacaatc
tggagggtagctgcatctgattccagttgggcacctccattggcgaatcaaggaatggct
ggtgctggtacatcaagttccgtcagaccagtaggatatggtggggttcagatgatgatg
aggcagctagcatctgttagtgaaaactttgcccatggttctctagataatgatgcttgg
actccatggccttctcagcatacctcaatgccttctcttccttcatcttcttccctcagg
atgaacagaaatgcaactggtctacgtattaggaatacttcaccctctgtaaacaatatg
tccgagttactcgctatggtagatatagtacgcgaggttttgccacatattccagatgaa
tttattgtacagaatctcctgagaaccaacaacatcgacattactgtcaataatcttatg
caatag
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