Musa acuminata (dessert banana): 135616835
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Entry
135616835 CDS
T03447
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
135616835
03009 Ribosome biogenesis [BR:
mus03009
]
135616835
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135616835
Spliceosome [BR:
mus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135616835
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
90S particles
Helicases
135616835
Pre-60S particles
135616835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SWI2_SNF2
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
135616835
NCBI-ProteinID:
XP_064972577
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All DBs
Position
BXJ2-7:5771146..5781499
Genome browser
AA seq
587 aa
AA seq
DB search
MSPAVEFHQVRKEKPNKKRKNRPKPDVGADANSVEGPVPVAEEEEVRHEEENEDKCHRDS
DEEKDDAREARDGDDVGDGAEETAPSAKKKKKGFGILTSEPFSRLPLSDLTMKAIQEMGF
ENMTQIQARAIPPLLAGKEVMGAARTGSGKTLAFLIPAVELLHNIHFMPRNGTGVIIICP
TRELAIQTHAVAKDLLKYHSQTLGLVIGGAGRKGEAEHLAKGVNLLVATPGRLLDHLKNT
KGFIYKNLMFLIIDEADRILEANFEEDMKQILKCLPKARQTALFTATQTKQVEEFACLSF
KEKPIYVGVDDGRSKVTVEGLQQGYCVVPSNKRFLVLYAFLKRNLSKKIMVFFSSCNSVK
YHSELLRYIQIDCFDIHGKQKQQKRTATFFDFCKAQKGILLCTDVAARGLDIPAVDWIVQ
YDPPDEPKEYIHRVGRTARGEGSEGNALLFLLPEEVQFLLYLKEAKVPVKEYEFNEKKVP
NLQSHLEKLVGENYFLSQSAKDAYKSYILAYNSHSMKNVFNVHHLNLKDVATSLCFVSPP
KVNLDLESSASKFRKKTHKIDGGQHGISASNPYGRQKADDQRQFARY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgcggtggagtttcaccaggttaggaaggagaagcccaacaagaagaggaag
aacaggccgaaacccgacgtgggtgcggacgccaacagtgtcgaaggccccgtaccggtg
gcggaagaggaagaagtccgacacgaagaagagaacgaagataagtgccaccgggactcg
gatgaggagaaggacgatgcccgcgaagcgagagacggagatgacgtcggtgacggcgcg
gaggagacggctccctccgccaagaagaagaaaaagggatttgggatcttgacttccgag
cccttctctcggctccccctttccgatctcaccatgaaggccatccaagagatggggttt
gagaacatgacgcagattcaagctagagcgataccacctctgttggcagggaaagaggtg
atgggtgctgccaggacaggttctggaaagactcttgctttcttgatacctgcagtcgag
ttgctgcataatatccattttatgcctcggaacggcactggggttatcattatctgtcca
acaagggagcttgccattcaaacacatgctgtggcgaaggatcttttgaagtaccattca
cagactcttggtttggttattggtggtgctggacgaaaaggagaagctgagcatcttgct
aagggggtaaatttattggtggctacacctggaaggcttttggaccatctcaaaaacacc
aaaggattcatttacaaaaatctgatgtttcttataattgatgaagctgatcgaattttg
gaggctaactttgaggaagatatgaagcaaatattaaagtgtttgccaaaggcaaggcaa
actgccctttttactgccacccaaaccaagcaggttgaggaatttgcttgtttgtcattt
aaggaaaagccaatatatgttggagttgatgatgggaggtcaaaggtcactgttgaaggg
ttgcagcaaggatattgtgtagttccaagtaacaaaaggtttctggtcttgtatgctttt
ctgaagagaaacctttcgaaaaagataatggtcttcttttcttcctgcaactcagtcaag
taccattcagaacttctcagatatattcaaattgattgttttgatatccatggaaagcaa
aagcagcagaaacgcacagccactttttttgacttctgcaaggcacaaaagggtatacta
ctctgcactgatgtagctgctcggggacttgatattcctgcggtggattggattgtgcaa
tatgatcctcctgacgaaccaaaggagtacattcacagggttggccggacagctcgtggg
gaaggcagcgaaggcaatgctttgcttttcctattgcctgaagaggtgcaattcctcctc
tatttgaaggaagcaaaggtacctgtcaaggaatacgagtttaatgaaaagaaagtgcca
aatttgcaatctcacctggagaaactagtgggagaaaactactttctaagccagtcagct
aaagatgcatacaaatcctatattttagcctacaattcacattctatgaagaatgtcttt
aatgtgcaccacctcaatctcaaggatgtggctacttctctttgctttgtctcaccccca
aaggtgaatttagatctggaaagcagtgcatccaagttcaggaagaagacgcacaaaatt
gatggaggccaacacggcatcagtgcaagcaacccctatgggagacagaaggctgatgat
caaagacagtttgcacgatactaa
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