Musa acuminata (dessert banana): 135616976
Help
Entry
135616976 CDS
T03447
Name
(RefSeq) protein GAMETOPHYTE DEFECTIVE 1-like
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135616976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mus03009
]
135616976
03016 Transfer RNA biogenesis [BR:
mus03016
]
135616976
03029 Mitochondrial biogenesis [BR:
mus03029
]
135616976
Enzymes [BR:
mus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
135616976
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
135616976
Transfer RNA biogenesis [BR:
mus03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
135616976
Mitochondrial biogenesis [BR:
mus03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
135616976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
135616976
NCBI-ProteinID:
XP_064972838
LinkDB
All DBs
Position
BXJ2-7:complement(7865142..7873602)
Genome browser
AA seq
665 aa
AA seq
DB search
MTLFFDFSIPFLERDSGGGGGGGTSSENKARKDARLRAVVRAMELGYAGVAYDRPFRGVL
SDADRCKIAPFPLSSLLKAAPALAASAAFHRDLLGAPLASPFRQYTRLTISAHCAASAVA
LNGNALLRTYDLVALRPLNQDAFDKACESSEVDIIAMDFSQKLPFRLKLPFIKLAIQRGL
YFEITYSHLIADVHVRRQILSDAKLLADWTRGKNLIFSSAASTVNDVRGPYDVANLAVFL
LGLSLERAKAAISGNCRSLVANALRKKHFYKETIKIERILPDEQSNSKRFWFDDWNEWDP
LSSGNGDLPSLDNIPKMFSSTSKPPFSSNSIDFTSIFSESPFLFGENAALTSSIKTFGSP
TAPNEIPAAVADDATDQVAIDESSLLNKISMTPTTLSQQKPACEDVLVSPDDMTTVLADS
KESCQSFELSECLKISDECMVSHTGTLPSATAVSKASNYTYNDDLLLSNADQTSSAVTEK
KPSNMLVEVQKSSDQFYNHAIETSNDAAEFVECIPDVAGDQMSVDDEGHFFADVVVKKDI
PKIVEQEQKRHGDHCMTLQKCLIQPVSSNTGASLISSGEDILSKGALKETKEQKEGVPFF
KIDALVEKNTTVVKDEIQKSETKSGRGNHRERLSYPAYPLPFKSLFKPLLFRKKLCKPKR
KRKHL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgacccttttcttcgattttagcatccccttcctcgagcgggacagcggcgggggcggc
ggaggtggcacctcgtcggagaacaaggcgcggaaggacgcgcggctgagggcggtggtg
agggccatggagctcggctacgccggcgtcgcctacgaccgccccttccgcggcgtcctg
tccgacgctgaccgctgcaagatcgcccctttccccctttcctccctcctcaaggccgcc
cccgccctcgcagcttccgccgccttccaccgcgacctcctcggcgctcccctcgcctcc
ccctttcgccagtacacccgcttgaccatctccgcccactgcgccgcctccgccgttgcc
ctcaatggcaacgccctactaaggacctacgacctagttgccctgcgccctctgaaccag
gacgccttcgacaaggcctgcgagtcctccgaggttgatataattgcaatggatttttct
caaaaacttcccttccgtctgaagcttccgttcattaagcttgctattcagcgtggatta
tattttgaaattacctattctcaccttatagctgatgttcatgttaggaggcaaatccta
tcagatgccaagctactagctgactggaccagaggaaagaatctcatcttttcaagtgct
gcttctactgttaatgatgttagagggccatatgacgttgccaacctggcagtatttttg
cttggtctgtctttggagcgagctaaagctgctatttcgggaaattgcaggtcactggta
gctaatgctctaaggaagaagcatttttacaaggaaactattaaaatcgaaagaatctta
ccggatgaacaatccaactcaaaaagattttggtttgatgactggaatgaatgggatcct
ctatctagtgggaacggtgatttgccatcattggataatatcccaaaaatgttctcttct
actagcaaaccgccttttagctcaaattcaattgatttcacatctatattcagtgaatca
ccatttttatttggtgaaaatgctgcattgacgtcatcaatcaagacatttgggtcacct
actgctcccaatgaaattcctgctgctgttgctgatgatgcaacagatcaagttgctatt
gatgaaagttcattgttaaacaagatatctatgactccgacaactctaagtcaacagaag
cctgcctgtgaagatgttctagtttccccagatgatatgacaacagtacttgctgattct
aaggaatcttgccaatcttttgagctcagtgaatgcctaaaaatttcagatgaatgtatg
gtttctcatactggtacgttgccttcagccactgcagtatcaaaggctagcaactacact
tataatgatgatcttctactatcaaatgctgatcaaacatcctctgctgtcacggaaaag
aaaccatctaatatgcttgtggaggttcagaaaagttcagatcagttttataaccatgcc
attgagacttcaaatgatgctgcagagtttgtggagtgcattcctgatgttgcaggtgat
cagatgtcagtggatgatgaagggcatttttttgctgatgtagtggtgaaaaaggatata
ccaaaaatagttgagcaagagcagaaacgtcacggtgatcattgcatgactctgcagaag
tgtcttatacaacctgtatcaagtaacacaggagcaagcttaatatcatcaggagaggat
attctatcaaaaggtgctttaaaggagaccaaagagcagaaggaaggagttccttttttt
aaaattgatgctctagtagagaaaaacacaactgtggtcaaagatgagatccagaagtca
gaaactaaatcaggaagaggaaaccatagagaaaggttatcttatccagcttatcctttg
ccttttaagagtctgtttaagcctttgcttttccggaagaaactgtgcaaaccaaaaaga
aagaggaagcatttatag
DBGET
integrated database retrieval system
