Musa acuminata (dessert banana): 135617235
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Entry
135617235 CDS
T03447
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135617235
04121 Ubiquitin system [BR:
mus04121
]
135617235
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135617235
Membrane trafficking [BR:
mus04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
135617235
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135617235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Rad50_zn_hook
DUF1272
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
135617235
NCBI-ProteinID:
XP_064973333
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All DBs
Position
BXJ2-7:11655120..11656983
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AA seq
394 aa
AA seq
DB search
MAMASSYWCYRCSRFVRVWPQDAIVCPNCDGGFLEEVGSPPPRLFPAAEPRRRRVPSTDA
HALGGDWSAAAAAPRHSSELRFRRNRRTSAGDRFHFNPVIVLRGPSEGGARDADRATTTS
FELYYDDGTGSGLRPLPESISDFLMGSGFDRLLEQLAQIEINGIGRGRGCEHPPASKTAI
ESMPTVEIVDDHIGKDCHCAICMDAFELGTEAREMPCKHIYHQDCILPWLSLRNSCPVCR
HELPTDVQAQGATGAEGDEQAAATGNEEETVGLTIWRLPGGGFAVGRFSGGRRAGEREFP
VVYTEMDGGFNSSGAPRRISWSSTSSRSRGSGGIGRAIRNFFSSFRLSRSASSSSRPSSA
SHPASSHRHGSGSFLRRRSRNRSTNWDENANVIA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgtcgtcctactggtgctatcgatgtagccgattcgtccgggtgtggccg
caggatgctatcgtttgccccaactgcgacggcggcttcctcgaggaggtgggcagccct
cctccccgccttttccccgccgctgagccccgccggcgccgggtgccctccaccgacgct
cacgcgcttggcggcgactggtccgcggcggccgccgcgccccgccactcctcggagctc
aggttccgtcgaaaccgccgcacgtccgccggcgaccgcttccactttaatccggttatc
gtcctccgcggcccgtccgagggcggcgcccgcgacgcggatcgagccaccaccaccagc
ttcgagctctactacgacgacggcaccggatccggcctccgccccttgccggaaagcatc
tcggatttcctaatgggctcgggcttcgaccgcctgctcgagcagctcgcccagatcgag
atcaacggcatcggtcgaggaagggggtgcgagcacccgccagcatcgaagaccgccatc
gagtcgatgcctaccgtagagatcgttgacgaccacatcgggaaagactgccattgcgcc
atctgcatggacgcgttcgagcttgggaccgaggcccgggagatgccttgcaagcacatc
tatcatcaagattgcatcttgccatggctttcgctccggaactcatgccccgtttgccgc
catgagctgccgacggacgtgcaagcacagggtgcgacgggggcagaaggagatgagcag
gcggcggctaccgggaacgaggaggagacagtcgggctgacgatatggcgacttccaggt
ggggggtttgccgtggggaggttctcaggtggtaggagagccggggaacgagagtttccg
gtggtgtacaccgagatggatggtgggttcaacagcagcggagctccaagaaggatctcg
tggtcctcgacaagtagtcggtcgaggggaagcggaggaattggtcgagctatccgcaat
ttcttctcgtccttcaggctgtcacgttcggcttcatcttcttcgcggccgagctcagca
tctcatcctgcatcgtctcacaggcacggaagtggttcatttctaaggaggcgatcgagg
aatcgatccaccaattgggatgagaacgccaatgtgattgcttga
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integrated database retrieval system
