Musa acuminata (dessert banana): 135617304
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Entry
135617304 CDS
T03447
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
135617304
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mus04040
]
135617304
Ion channels [BR:
mus04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
135617304
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
135617304
NCBI-ProteinID:
XP_064973447
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Position
BXJ2-7:complement(14005261..14013392)
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AA seq
734 aa
AA seq
DB search
MICKMFDFGYKAQYMDGQRENFLRLEESSPRLSHASDTERMNRCTFNVEGHGRGSKSTSR
SLKGGVRKGPEGLKFLGRSFRFGASREVFPEDLKVSEKKIFDPQDKFLILMNRLFVISCI
LAVSVDPLFFYLPIKDENEKSTCLGIDRKLAIASTTVRTIIDCFYLIRMALQFRTAYIAP
STRVFGRGELVIDPAQIAKQYLRSNFIVDFLSVLPLPQIVVWRFLHRSKGSDVLATKNAL
FAIVLLQYIPRLSRILPLTSELKRTAGVFAESAWAGAAYYLLWYMLACHVVGAFWYVLAV
EREDDCWHAVCKTKNDICNANFLYCGNEHIDGYDKWQNVSAQVLQDLCLPHDDNSFFSFG
IFEQSLNSNIVASKEFCIKLAYCFWWGLQNLSTLGQGLQTSTYLGEVIFSIAIAVLGLVL
FALLIGNMQTYLQSMAIRLEEMRVKRRDSELWMHHRMLPSDLRERVRRYDQYKWLETRGV
DEEGLVQSLPKDLRRDIKRHLCLALVKRVPLFENLDERLLDAICERLKPTLFTENTYILR
EGDPVDEMLFIIRGRLESITTDGGRSGFFNRSFLKERDFCGEELLTWALDPKSGGNLPTS
TRTVKALKEVEAFALNADELKFVAGQFRRLHSRQVQHTFRFYSQLWRTWAACFIQAAWRR
HARRKMVDLQQREEEAGLRNNFVGGTTSLGAAIYASRFAANALRSVHRLRNRSVRELVRL
QKPPEPDFTADDAD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgatatgcaagatgtttgactttggttacaaagcacaatacatggatggccagagagaa
aattttttgagactggaagaatcaagccctagattgtcccatgcttctgacacagagaga
atgaatagatgcacattcaatgttgaggggcatggtcgaggatcaaagagcacatcaaga
tccttgaagggaggagtgagaaaaggacctgaaggacttaaatttcttggtcggtcattt
cggtttggtgcttctagggaagtttttccagaagatctgaaggtttctgagaagaagatt
tttgatcctcaagataaatttcttatcctgatgaacaggctttttgtaatatcatgtatt
cttgcagtatcagtggatcctttatttttttatcttcccataaaagatgaaaatgaaaaa
tcaacttgccttggtatagaccggaagttagcgattgcatcaactacagtgcggacaatc
attgattgtttctatcttattcgtatggctcttcaatttcgtactgcttacattgctcca
tcaacccgggtttttggcagaggtgaacttgttatcgacccagcacagattgcaaagcaa
tacttaagaagcaactttattgttgactttctctcagtcctgccacttccacagattgta
gtttggaggttccttcacagatctaaaggatcagatgtgttggctacaaaaaatgcgttg
tttgccattgttctgcttcagtatattcctagattgtctcgcattcttcctctaacatca
gaactaaagaggactgctggtgtctttgcggaaagtgcttgggccggtgctgcatattat
ttattgtggtatatgctagcttgtcatgttgtcggtgctttctggtacgtgctggctgtt
gagcgtgaagatgattgttggcatgcagtttgtaaaacaaaaaatgacatatgtaacgca
aatttcttgtattgtggcaatgaacatattgatggttatgacaagtggcagaatgtcagt
gcacaagttcttcaagatttatgtttacctcatgatgacaattcgttcttcagttttgga
atttttgagcagtccttgaattctaatattgttgcatcaaaagaattctgtatcaagctt
gcctattgtttctggtggggtctgcagaatttaagtaccctcggccaaggtcttcaaacg
agtacttatcttggggaggttatcttctcaattgcaattgccgtacttggacttgttcta
tttgccctccttataggtaacatgcagacatatcttcagtcaatggcaatacggctcgaa
gagatgagagttaaaaggcgtgactcggagctatggatgcaccatcggatgttgccatca
gatctcagagaacgtgttagacgatatgatcagtataagtggttggagacaagaggagtg
gatgaagaaggcttggttcagagccttcccaaggaccttaggcgagatatcaaacgacat
ctctgtttggcattggttaagagggtccctctgttcgagaatctggatgaacgattgctg
gatgcaatttgtgagcgactaaaacccactctctttacagagaatacatatattctgagg
gagggagatccggtcgatgagatgctcttcatcattcgtggacgactggagagtataacc
actgacggtggacgaagtgggttcttcaatagaagttttctgaaagagcgtgatttctgt
ggcgaggagctgttgacctgggctttggatcccaagtccggtggtaatcttccaacttcg
actaggacagtgaaggccctgaaggaggtcgaagctttcgcgttaaacgccgatgaacta
aaattcgtggcaggccagttcaggcgactccatagcaggcaagttcagcatacatttcgc
ttctactcgcagctgtggaggacgtgggcagcttgctttatccaagccgcatggcggcgc
catgccaggaggaagatggtggatctccaacagcgggaagaggaggcaggactcagaaac
aactttgtcgggggcacaacgagcctcggtgcagccatctatgcatcacgatttgcagct
aacgccctccgaagtgtgcatcggctccggaaccgtagtgttagggagctggtgagattg
caaaagccacctgagcctgatttcacagccgacgatgcggattaa
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