Musa acuminata (dessert banana): 135617480
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Entry
135617480 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC135617480 isoform X1
KO
K14856
protein SDA1
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mus03009
]
135617480
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
135617480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
Motif
Other DBs
NCBI-GeneID:
135617480
NCBI-ProteinID:
XP_064973794
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All DBs
Position
BXJ2-7:27454833..27466656
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AA seq
1010 aa
AA seq
DB search
MAPPLSTGLRTLYPSLIFVPGAWVSMDPGEGRELPSAGELDEETIARKKSRRVSFADITA
IHVFDRDDDCETPPDSRQVSADGGADVGVVGFHEGVPDGYGSKGSLRGREDEDDDENEED
DEDDGEQERLVYDLKPTDYLDQLCSMGYNSTQLAPFTDPPYACPKQKIEEHNLNYPVIAS
AILLSAAGRTAEKLSLPALQSKMKCDPEGYEAELQLLYRHFESTLHLFRCQSALRPSSDL
SLAKDLGDLVMFIAHVTPFYPDKLANFPLQVADLLRVNSRALPSSLRCHLVQALILLVNR
KIIDIEETLELFMDLQILGDRTLRKLAFSHVVHNIRRMNQKHKNEAKNRKLQNTLFFMLQ
GAEEQRAKRSLVILCDLHRWRVWFDDRTANAICTACFHSSSRIMISTLSFLLGYEQIEEE
DDCEASSSEDDTTSQQPITLSREAIYKANHKGTVASRKKKKAKLQRVIRNMKRQQRITSQ
SNSSGYYSPITHLKDAQGFAEKLFSRLQRCNERFEDRMMMLKVVARTVGLHRLILLNFYP
FLQKYVQPHQRDVTDLLAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNV
VREICIRMPLLMNEDLLQDLVLYKKSHEKAVSSAARSLITLFKEICPSLLVKKDRGRPVN
PKARPKAYGEVSIATDVPDIELLEHVDNSMTDSSDAEASASDLDDEYDSDAETEKEDDSL
EDEEEDDEVSDEKNEEDLGNSDNIDGEEDDGDDLDDDIDENAAYDEYDSDTKEDVDLSDD
NMDISSELDASRKKSSNDICNDDDLSNHECACDDNDEIKEEEKAKSKKRKFADYVGQLNT
SESSLRTLKRLTMAKMSQKASDETDGILSNEDFQRIKELKAKKEAKLVMAQQGLLRKGID
SKVSSFKIPSSEQLSIKPVDPAMLEVHIKRKLSKEERLTLVRAGREDRGKYQARTAVKQK
KTGGLSNRQKEHKKKMPLSAKRAKVARSRQEKKQRQRRSGKQFQGRKAWK
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggccccaccgctttcgaccggactccgaaccctgtatccatccctaatctttgttcct
ggcgcctgggtctccatggatcccggcgaggggagggagctcccgagcgccggcgagctc
gacgaggaaacgatcgcgaggaagaagtcccgccgggtgagctttgccgacatcaccgct
atccatgtcttcgaccgcgacgacgactgcgagactccgccggactcgaggcaggtctcc
gccgatggaggcgcggacgtgggggtggtagggttccacgagggtgtccctgacggctac
ggttccaaggggtcgctccgtgggcgggaggatgaagacgatgacgagaacgaggaggac
gatgaggacgacggcgaacaggagcggttggtgtacgacctaaagcccaccgactacttg
gaccagctgtgctcgatgggctacaactcgactcagcttgcccctttcaccgacccaccc
tacgcttgccctaagcagaagatcgaggagcacaacctgaactaccccgtgatagcctcc
gctatcctcctctcggctgccggccggacagcggaaaagctgagcctcccggcgctgcag
tccaagatgaagtgcgaccccgaggggtacgaggcggagctccaacttctctaccgccac
ttcgagtccaccctccacctcttccgctgccagtccgcccttaggccctcctccgacctc
tccctagccaaggatctcggggacttggtcatgttcatcgcccatgtcacccctttctac
ccggataagcttgcaaacttccctctacaggtggccgacctcctccgtgtcaattcccgc
gcccttccgtcatcgttgaggtgtcatcttgtgcaagccctgatcctcctcgtcaataga
aagatcattgatattgaagaaactctcgaattgtttatggaccttcagattcttggtgac
cggaccttaagaaaactggccttttcgcatgtcgtacataacattcgacgcatgaaccag
aaacacaagaacgaagccaagaatcgcaaactgcagaatactcttttttttatgctgcag
ggggcggaggaacagagggccaaaaggtcgcttgttattctttgtgatctgcatagatgg
agggtgtggtttgatgaccgtacagctaatgccatttgcactgcctgtttccattcgtct
tcaaggattatgatatctactctctcatttcttcttggttatgaacaaattgaagaggag
gatgactgtgaagcctcaagcagtgaagacgatacaactagtcaacagcctattactctt
agccgagaagctatttacaaggcaaatcataaaggtacggttgccagcaggaaaaaaaag
aaggcaaagttgcagcgtgtgatacgcaacatgaaaaggcagcagcgaataacatcacaa
agtaacagctctggttactattcacctattactcatttaaaagatgcacagggtttcgct
gagaaactgttctctcgccttcaaagatgcaatgaacgcttcgaggataggatgatgatg
ttgaaagtagtagccagaactgttggattgcaccgtctgatcttgttaaatttttatccg
tttcttcaaaaatatgttcagcctcatcaacgtgatgtcactgatttgcttgctgcagct
gtccaggcctgccatgatatggtacctcctgatgcggttgaacccttatttaaacaaatt
gtgaatcaatttgtgcatgatcgttctcgcacagaggccattgctgttgggctgaatgtt
gtgagggagatctgtatcaggatgcctttgttaatgaatgaagatctgcttcaagacttg
gtcttgtacaaaaaatcacatgagaaggcagtttcttcagcagctcgctccttgataact
ttattcaaagagatatgcccttctttattggtcaaaaaggaccgtggccgtccggtcaat
cccaaagcaaggccaaaagcatatggagaagttagtatagctactgatgtgcctgacata
gagttgctggaacacgttgataactcgatgactgacagttctgatgctgaggcttctgca
tcagatttggatgatgagtatgacagtgatgctgagacagagaaagaggatgattctttg
gaagatgaagaagaggatgatgaggtttcagatgaaaaaaatgaagaagatttaggtaac
agtgataacattgatggagaggaagatgatggtgatgatcttgatgatgatattgatgag
aatgctgcctatgatgaatatgatagtgatactaaagaagatgtggatcttagtgatgat
aatatggatatctccagtgagctagatgcatcaaggaaaaagtcttctaatgacatctgc
aatgatgatgacctcagtaatcatgaatgcgcttgtgatgacaacgatgaaataaaggaa
gaggagaaggccaaatcaaagaagaggaagtttgcggattatgttggacaactgaatact
tcagaatcaagtcttcgcacccttaaaagactaacaatggccaagatgtcacagaaagca
tcagatgaaacagatggaattctttctaatgaagattttcaacgtataaaagagttgaag
gcaaagaaagaagcaaagctggttatggctcagcaaggtcttttgagaaagggtatagac
tcgaaagtctcatctttcaaaattccctcttctgagcaattaagtataaagccagtggat
cctgctatgctagaggtccacattaaaagaaagcttagcaaggaggaacgactgacccta
gtaagagctgggagggaggatagaggaaagtatcaggctagaactgctgtgaaacaaaaa
aagacgggtggtctaagcaatcgccaaaaggaacataaaaagaagatgcctctttctgcc
aaaagagcaaaagtagctcgctctaggcaggagaaaaaacagcggcaaaggcggtcaggc
aagcagttccagggaaggaaagcatggaagtga
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