Musa acuminata (dessert banana): 135617976
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Entry
135617976 CDS
T03447
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135617976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
135617976
03036 Chromosome and associated proteins [BR:
mus03036
]
135617976
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135617976
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135617976
PBAF complex
135617976
GBAF(ncBAF) complex
135617976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
135617976
NCBI-ProteinID:
XP_064974916
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All DBs
Position
BXJ2-7:37585269..37592066
Genome browser
AA seq
944 aa
AA seq
DB search
MEAKGRDGPPASASVDTAVAAAAAAPLLMAETLAEAPRRRASGSKRKASASSSSTPVKRQ
AKERNLLHHLFPVHNGPCTRARQSPHKHAAASHRSVEHAAASAWASEARGTDASASGGPI
KAEEEEEVEEPLVDVEFEAVRSRGVDVHAVPTAAGWFSWKVIHPVEKHMLPSFFSGKSEN
RTPEVYMEIRNSIIKKFHSDPQTQVELKDFSELSVGDMDARQEILEFLDHWGLINFHPFP
PSENEASKSDADDREKTSTLVDKMYQFETIQSFPRLATKKEESLVPAVPPCLLPESALLD
DLIRPVGPSVEYHCNSCSADCSRKRYHCQKQADFDLCADCYNDGKFGSGMLPADFILMES
AEGPGLSVGSWTDQETLLLLEALELFGENWNEIAEHVATKTKAQCILHFLQMPIEDSFLE
GGDDDDDVNESNPGSKDQILSTKESTATNTSESVEDDKKEAKEETSHTNAPDAEAKKSES
SDIVDEPITSKTDRLVNKNTADVNICHETGASFAIDALKAAFQAVGYFPEQGGLGSFAEA
GNPVMALAVFLSGLVESDAVITSCRSSLKAMSEDSPSIQLATRHCFLLEDPPIDRKDPHL
SVSAVAETNNEEAHKDGNKTQTLDATDESKEKNEISTSVDNDGNSSNLLPDFSLKQIDEK
EVNDVIPSKAVPTTVQESIDQSLSGDQCMTSNVKDVTDASLPVDPMQSTMKETENLASQG
EDSKSQEKEIIGSKSVGEKPNTMTNSEDLISADKVQQHTDIAKINTKVVLEEQECVQLGA
SANETKGKADEGERTESHSDDEKNSDPTGVDDDHNIDRLKRAAVTALSAAALKAKLLAKL
EENEILKLVSLVIEKQLHKLEAKLAFFADIDSVVLRMREQTEKARQRLMLERSQIIAARL
GVPTSSLRANPATLPANRLAMGYGATGIKPPNMAWQKPPPVRRP
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaagggccgtgatggacccccagcttcggcaagcgtcgacacggcggtggcg
gcggcagcagcggcgccgttactcatggccgaaaccctagctgaagctccccggaggaga
gccagcggttctaagaggaaagcctcggcgtcatcctcctccacccccgtgaagcgccag
gccaaggagagaaaccttctccaccacctcttccccgtccataacggtccctgcacccga
gctcggcaatccccccacaagcacgcggctgcctcccataggtctgtggagcatgcggcg
gcctccgcgtgggcgtcggaggctagaggcacggacgcttccgcctcgggaggcccgatc
aaagcggaggaagaggaggaggtcgaggagccgctcgtggatgtggagtttgaggccgtt
cgatctagaggagtcgacgttcatgccgtccctacggctgccggctggttctcatggaaa
gtgatccaccccgttgagaagcatatgttgccctcatttttcagtggaaagtctgagaac
cggacacctgaagtgtacatggaaattcggaattctattattaagaaatttcattctgac
ccacagacacaggtggaacttaaagatttctcagagttgtcggttggagatatggatgca
aggcaagaaatcttggaattcttggaccattggggtcttataaatttccatccttttccc
ccgtctgagaacgaagcaagcaaatctgatgctgatgacagagaaaaaacttcaactttg
gtcgataagatgtatcagtttgaaacaattcagtcatttccccgtcttgctacgaagaaa
gaagagtccttggtacctgcggtgcccccttgcttgcttccggagtctgcccttcttgat
gatttgattaggccagttggtccttctgttgagtaccactgcaactcctgctcagctgat
tgctctagaaagcgctaccattgccaaaagcaggcagattttgatttgtgcgctgattgc
tacaacgatgggaagtttggatcaggcatgttaccagctgattttattctaatggaatct
gcagagggtcctggtttaagtgttgggagttggacagatcaggagactttgcttctacta
gaagcattagaactttttggggagaattggaatgagattgctgaacatgttgctactaaa
accaaagctcaatgcatcttacattttcttcaaatgcccattgaggattcttttctagaa
ggtggtgatgatgatgatgatgtcaatgagagtaacccaggtagcaaggaccaaattctg
tcgactaaagaatcaacagccacaaatacttctgaatcggtggaagatgacaagaaagaa
gcaaaggaggaaacctctcatacaaatgctcctgatgctgaagcaaaaaaatctgaaagt
tctgacattgtagatgaacctataacatccaaaacagatcgtttggttaataagaatact
gctgatgttaatatttgccatgaaactggagccagctttgctatcgatgcactgaaggct
gcatttcaggctgtagggtactttcctgaacaaggtggattgggttcatttgcagaagct
ggaaacccagtcatggcactcgctgtatttttgtcaggtcttgttgaatctgatgctgtt
atcacctcttgccgcagctccctgaaagccatgtcagaggattcacctagcatccagctt
gctaccaggcattgttttcttcttgaagatccaccaattgataggaaggatccacatctc
tctgtgagtgctgttgctgaaaccaacaatgaggaggctcacaaggatggaaacaaaaca
caaactttagatgccactgacgaatctaaggagaagaatgagatttctacttctgtggat
aatgatgggaactcatccaatttgttgcctgatttctcattaaaacaaattgatgaaaaa
gaagtaaatgatgtgattccttcgaaagcagtgccaaccactgtacaggaatcaattgat
cagtctttgtctggggaccagtgtatgactagtaatgtgaaggatgtaactgatgcttct
ttgcctgtagatcctatgcaaagcactatgaaggaaactgaaaatttagcttctcaaggt
gaagattcaaagagtcaggagaaggaaattattggttctaagtcagtgggggagaaacct
aataccatgacaaattcagaggatttaatttcagcagacaaggtccaacaacatacagat
atagctaagataaatactaaagttgttttggaagaacaagagtgtgtgcaactaggtgct
tcagctaacgaaaccaaaggaaaagcagatgagggtgagagaacagagtcacacagtgat
gatgagaaaaattctgatccaactggagttgatgatgatcataatatagacaggttgaag
cgtgctgcggtcaccgcactctcggctgctgctctaaaggctaagcttctcgccaagttg
gaagaaaatgaaattctgaaacttgtttcgttggttattgaaaagcagttgcacaagttg
gaggcaaagttggcattttttgctgatattgatagtgtcgtcttgaggatgagagaacaa
acagaaaaagcaagacagagactaatgcttgaacgctcgcaaataattgctgctagactt
ggtgtacccacttcctcgctcagagccaacccagctaccttaccagcaaacagattagcc
atggggtatggtgccactggtataaaaccgcctaacatggcatggcagaagccaccacct
gtaagaaggccatga
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