Musa acuminata (dessert banana): 135618447
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Entry
135618447 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC135618447
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135618447
09123 Folding, sorting and degradation
03018 RNA degradation
135618447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135618447
03041 Spliceosome [BR:
mus03041
]
135618447
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135618447
mRNA degradation factors
5'-3' decay
Lsm complex
135618447
Spliceosome [BR:
mus03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135618447
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
ADH_N_2
Motif
Other DBs
NCBI-GeneID:
135618447
NCBI-ProteinID:
XP_064975389
LinkDB
All DBs
Position
BXJ2-8:complement(42131218..42133484)
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AA seq
94 aa
AA seq
DB search
MNGGSGGGGGGSGAGKMPTNFLKSIRGRPVVVKLNSGVDYRGILACLDPYMNIAMEQTEE
YVNGQLKNKYGDAFIRGNNVLYISTSKRTLADGA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggcagtggcggcggtggaggaggaagtggcgcggggaagatgccgaccaac
tttctgaagtcgatccgaggccggccggtcgtcgtgaagctcaactccggagtcgactat
agaggtattctagcttgtttggatccatacatgaacattgcaatggagcaaacggaagaa
tatgttaatggtcagctaaagaacaagtacggtgatgctttcatcagaggaaataatgtt
ctgtacatcagcacctccaaaaggactcttgctgatggggcatga
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