Musa acuminata (dessert banana): 135618478
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Entry
135618478 CDS
T03447
Name
(RefSeq) chromatin-remodeling ATPase INO80-like isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135618478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
135618478
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
135618478
INO80 complex (yeast)
135618478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
135618478
NCBI-ProteinID:
XP_064975425
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All DBs
Position
BXJ2-8:complement(215266..229378)
Genome browser
AA seq
1555 aa
AA seq
DB search
MEPRRHHSKNGLSYSNLFNLEPLMSFQVPQPDDEFHNYEDSSQDENRSSQGQGVLFERCN
GEISPELIRRRRRHGVESEAVANSSLRNDTDSNDEVDEEYENGISEEQYRAMLSDHVQKY
RKVKSKESLSGLASSRIAMSGTKRSHGSKTRKFTGEPLVSAKGETTSRKMEISPGYYEAD
LDVDYDGGNRYTLSMDSTYLDIGEGITYQIPPTYDKLVASLNLPSIADIIVEENFLNGSL
DLRSLAAMIATDRRFDTLNQGGLNEPQPQYESLQARLKALSFGNSDKKFTLQVCDIGLDP
FSIPEGAAGRIRRLIMSDSGTLQVYYVKVLEKGDTYEIIERSLPKKQIVKKDPSEIEKEE
IEKIGKVWFNIVRRDIPKHHKIFTNFHKKQLTDAKRFSETCQREVKLKVSRSLRLMRSAA
VRTRRLARDMLIFWKKVDKEQAELRKKEERDAAEALKREEELREAKRQQQRLNFLISQTE
LYSHFMGNKSSAQPVENLLVVEGEAKLPEEESLPLDSKSEDEEDPEEVELKKEAHRAAKQ
AVSQQKKITNEFDYACLKLRQVAETKDQANDSAGGSNDIDLLNPSTMPVTSTVQTPEMFK
GHLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP
SSVLNNWADEVSRFCPDFRTLPYWGGLNERTVLRKNINAKRLYKRDARFHILITSYQLIV
TDEKYLRRLKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALL
HFIMPTLFDSHEQFDEWFSKGIESHAEHGGTLNEHQLNRLHAVLKPFMLRRVKKDVISEM
TGKTEITVHCNLSSRQQAFYRAIKNKISLAELFDGSRGHMNEKKIVNLMNIVIQLRKVCN
HPELFERNEGSSYFYFAEIPNSLLPSPLEGVDVNYAGNRNPITYKVPKLIHQEIIRSTEV
PFSVPRRGVHCEYFERLFDIFSPGNIYESELPKYKCLVNSSEVSGTFGFTRLMDLSPIEV
SFLAKCVLLERLFFSVLRWNRQLIDETLDLFMETEGDDLENSHLDRQTTRTIARMLLLPT
RSEASLLRRRLATGLGDAPYEALVTSHNDRYTSNIRLLRAMYAFIPRARAPPIHAQCPDR
SFAYQINEELHHPWMKKLFLGFARTSEFNGPRRPMHHHHLIEEISQSYAIEPIFQLPYRI
FGSSPPMQSFDPAKMLTDSGKLKTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRK
YKYFRLDGSSTIMDRRDMVRDFQRRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPT
LDLQAMDRAHRLGQTKEVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLKP
EDVVSLLLDDAQLEQKLREIPLQQPKDRQKKKRLKGIRVDEEGDVSLEDFTNSGSAENEL
EKENAHRKKRKAKSQKDNPLQLQNPQRTAEDMDLLLETDEPSPSGYEEDHIVQERSKRLR
RPTKSINENLEPAFNSADNMPIMNSSEDQPTSYDYKSGVYGSGSQDALPSQAPVA
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcggcggcaccactcgaagaacggcctctcctactccaatctcttcaacctc
gagccgttaatgagctttcaagtaccacaaccagatgatgaatttcataattatgaggat
agtagtcaggacgagaatagaagcagccaaggtcagggggttctttttgagcggtgcaat
ggtgaaatatctccagagttgatccggaggaggaggaggcatggtgtcgagtctgaggct
gttgcaaactcatccttgaggaatgatactgacagtaatgatgaggtcgatgaagaatat
gaaaacggaatatccgaggaacaataccgtgcaatgctcagtgatcatgtgcaaaaatat
aggaaagtgaagtccaaagaatcgttgtcaggattggcttcctctcggatagcaatgtca
ggtacaaagcgaagtcatgggagtaaaactaggaagttcactggtgagcctctagtttct
gctaagggggaaacaacatcgcgtaagatggaaatatcacctggatactacgaagctgat
ttggatgtggattacgatgggggtaataggtacactttgtccatggattctacttacttg
gacattggtgagggtatcacataccaaatacctccaacttatgataagcttgtggcttcg
ctgaacttaccaagtattgctgacattatagtcgaggaaaatttcctaaatggttcttta
gatttgcggtctctggctgccatgattgctactgatagaaggtttgacacgctcaatcaa
ggtggattgaatgagcctcagccccagtatgaatcacttcaggctaggttaaaggcactc
tcatttggtaattctgataaaaaatttacacttcaagtatgcgacattggtctggatcca
ttttcaattccggaaggtgcagctggtaggatccgacggttaatcatgtcagattctggt
actctacaggtttattatgtcaaagtcttggagaaaggggacacttatgagattattgaa
cggagcttaccaaagaagcaaatagtgaagaaagatccttctgagattgagaaggaagag
atagagaagatagggaaagtctggtttaatattgtaagaagggatattccgaagcatcat
aagatatttactaactttcacaagaaacaactcacagatgctaaacgtttttcggagact
tgtcaaagagaggtaaagttgaaggtgagtaggtcactaagactgatgagaagtgctgcg
gttcgaactagaaggctagctagagacatgttgatattctggaagaaagtagacaaggag
caggctgaactgaggaagaaagaagaaagggatgcagctgaagctttgaagcgtgaggaa
gaattacgtgaagctaagagacaacagcagagacttaactttctcatatcacagacggag
ctgtacagtcatttcatggggaacaagtcttcagcacaacctgtggagaacttattggtg
gtagaaggtgaagctaaacttccagaagaggaatcattgcctcttgattctaaatcagag
gatgaagaggatccagaagaagttgaacttaagaaggaagctcacagggccgccaaacaa
gctgtttctcagcagaaaaagattacaaatgaatttgattatgcatgtttaaagctgcga
caagtagctgaaaccaaggatcaggcaaatgactcagctggagggtcaaatgacatagac
cttctaaacccctccacaatgcctgtaacatcaactgtacaaacaccggagatgtttaaa
gggcatcttaaagaatatcagctgaaaggattacaatggctagttaactgttatgaacag
ggtttgaatggaattcttgctgatgaaatgggccttggaaagacaatccaagctatggcc
ttcttggctcatttggctgaggaaaagaatatttggggtccatttctggttgttgcacca
tcttctgtcttgaataattgggctgatgaagtcagtcggttctgccctgatttcagaaca
cttccatactggggtgggttaaatgaaagaacagtactcaggaaaaacattaatgcaaag
cgtctttataaaagggatgctagatttcacatactaattacaagctaccagttgattgtg
actgacgagaagtacttacgacggctaaaatggcaatatatggttttagacgaagcccaa
gctataaaaagttcaagcagtatacgatggaagacgttgctcagctttaactgtagaaat
cgcttgcttctgactggaactccaatacaaaacaatatggccgagttgtgggcccttctt
cattttattatgccaaccttgtttgacagtcatgagcagtttgatgagtggttttccaaa
ggtattgagagtcatgcagaacatggaggcaccttaaatgaacatcagctcaatagactg
catgcagtattgaagcctttcatgctgaggcgagttaagaaagatgtcatatcagagatg
acagggaaaacagaaatcacagttcattgtaacttgagttctcgacagcaggctttttat
cgtgctataaagaacaagatatcccttgccgagctttttgatggtagccgtggccatatg
aatgagaagaaaatagttaacttgatgaatattgtcatacaattaaggaaggtgtgcaat
catccagagttgtttgagcgtaatgaaggaagctcatatttttactttgcggagatccca
aattctcttcttccatctccattggagggagtagatgttaattatgcaggaaataggaat
ccaataacatataaggtgccaaagctgatccatcaagaaattattcgaagcactgaagta
cctttttctgttcctcgacgtggtgttcactgtgaatattttgagaggctttttgatata
ttttcaccaggcaacatttatgagtctgaattgccaaagtataaatgcctagtaaactct
tctgaagttagtggaacatttggatttactcgtctgatggatttatcacctatagaagtc
tcatttttagccaagtgtgtgctacttgagaggctgttcttttctgtcttaaggtggaat
agacaactcattgatgaaaccttggacctgtttatggagacagaaggtgatgatcttgaa
aacagtcatttggatagacaaactactagaactattgcacggatgttgctgttgccaaca
aggtctgaagcaagcttgcttagaagaaggcttgcaactggtcttggtgatgccccatat
gaggctttggttacctctcataatgataggtatacatcgaacatcaggcttttgcgtgca
atgtatgcattcattccacgagccagagctccaccaatacatgctcagtgtcctgacagg
agctttgcctaccaaataaatgaggaacttcatcatccttggatgaagaaattgtttctt
ggatttgcacgcacctctgagtttaatggtcctagaaggcctatgcatcatcatcacttg
atcgaagagatttctcagtcatatgcgattgagcccatttttcagcttccatacaggatt
tttggttcttcaccacccatgcaaagctttgatcctgctaaaatgctcacggattctggg
aagcttaaaacactggatatactactgaaacgtctccgggctgaaaatcatcgtgtgctt
ttatttgcacagatgacaaaaatgttgaatattcttgaggactatatgaactataggaag
tacaagtattttcgactagatggatcatctactattatggaccgtcgtgacatggtcaga
gacttccagcgcaggaatgatatttttgttttcttgctgagtacaagagctggagggctt
ggtattaatttgactgctgctgatactgtcatcttctatgagagtgactggaatccaact
ttagacttacaggcaatggatagggcacatcgattgggtcagacaaaggaggttaccgtt
tatagactcatttgcaaagaaacagttgaagaaaagattttgcaacgggcaagccagaag
aataccgtgcagcagcttgtcatgacaggtggtcatgttcagggtgatctcttgaagcct
gaggatgttgtttctttactccttgatgatgctcagttggagcagaaattgagagaaata
ccgttacagcagccaaaggatcgacagaagaaaaagcggttaaagggaatacgagtagat
gaggagggggatgtatctctggaggacttcacaaacagtggttctgcagaaaacgagttg
gagaaagagaatgcacataggaaaaagaggaaagcaaaatcccagaaggataatccttta
cagttgcagaaccctcagagaactgcagaggacatggatctgctacttgaaactgatgaa
cccagtccaagtgggtatgaggaagatcatattgtccaagaaaggtcaaaaagattaaga
aggccaacaaagagcatcaatgagaatcttgaacctgcattcaactctgcagacaacatg
cccattatgaactcttccgaagaccagccgacttcatatgactataaatctggtgtctac
gggtctggttcacaggatgccttgccatctcaagctccggttgcataa
DBGET
integrated database retrieval system
