Musa acuminata (dessert banana): 135618560
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Entry
135618560 CDS
T03447
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135618560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
135618560
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
135618560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
DUF6338
Kyano_Gp96
Motif
Other DBs
NCBI-GeneID:
135618560
NCBI-ProteinID:
XP_064975595
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All DBs
Position
BXJ2-8:1539030..1544944
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AA seq
1199 aa
AA seq
DB search
MSKRRLSHCNHPINGTPFEAYYHGSWHGVDHISIRNGSTFAKLNYHGTMIVDKVDGDCLR
MRSRKASLSDCIHFLKPGVEVCVLSRHPVSANFGQEVQKPLLSWHDAIIISIKKVRHVDH
CSFLFSVMICTNKSSVSEKKGRNDRWAEVVPIDNISILQKLQSEPCEDGYYQWNSTVDCV
SYGKSKLLNEAFSSEVAWLLVLSTLKGMSFDLKLVQNKLVSFITKSYQESASLSNLQSDG
ATNITNSSSHETIKIMRFQWSNEILKPKIQTVVMAPSEEITPEKATEANHHVVNVESDSE
VEFLYEHTSLRHSKRLKVVPDRFSSYSSPDFGRCTKKIVIEGINGTDETCIPFKSGVLLE
GDLDYVELQQQKLLEGKSALLHSRHSSNLHEMTLIGLHKRGKDGSTDPSSNEIDHIPLHV
YKRRFKRKKLANPNECKEVIEKCIGNIRNQIERQFEPIVPQAAYQPTASPKEEEEEDFNW
TPLADTPAEQKEHEDLWKEMEHSLTTLALLEQKQAVNFESQTEGTFNSVEYGEEKCQHDY
ELHDEIGLRCRLCSFVCTEIKHVSPPFLQVDGWNSFKEKFVDQTLWIERYDLELNALGDA
ISSREISLSERCENVWSLIDDLQSKLHLHQKKAFEFIWKNTTGSLKPEEMNHLSENTGGC
VISHSPGSGKTLLIIAFIVSYLRLFPKSRPLVLAPKSAIHTWSKEFQKWGISVPVYLIQR
ENKFRTSSFRTSMPSRKMRQIMDSVKKLQQWHENPSILLMNYSSFFALSKQYSKLEHIRF
VAEVLQKSPGILILDEGHNPRSTKSKLRKLLMEVKTENRVLLSGTVFQNNFEEYFNTLAL
ARPRFVDDVINELEPNMLNLFDRNKQKQAKTKIRKERLARKLFMEKVGQNIESNKEHDRK
QGFGLLNKITGGFVDVYGSEILDMLPGLEIYTIMLASTELQHEMLMKLQNSVPHKRYPLE
LEILVTVCSIHPWLVKSVGCVTSFFSADELETISKCRENFRLGSKVNFVIDLVHKSDIRG
EKVLVFCHNISPLNFLVDLFKLIFGWNKGEEVLVLQGDQELPLRAKIMDKFNGDVHGKCK
VLLASTTACAEGISLTAASRLVMLDSEWNHSKTRQAIARAFRPGQEKVVYVYLLLASGTW
EEGKYKSNARKAWMSKMIFLGRYIEFSSSRQVEHIDDELLRELVEEDEIKMLQMIMRPS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggagattgtctcactgcaaccatccgattaatggaactccctttgaggca
tattatcatggatcttggcatggagtagatcatattagcatcagaaatggaagtactttt
gcaaagttaaactaccacggaaccatgattgtggataaagtagatggtgattgtctacgt
atgagatctaggaaagcaagcttgagtgattgcatccattttctgaagcctggcgtagag
gtgtgtgtgctttcacgtcatccagtctcagcaaattttggccaagaagtgcaaaaacct
ttgctctcttggcatgatgcaataattatctcgatcaagaaagtccgtcatgtagatcac
tgcagtttcctattctcggtcatgatttgtacaaacaaatcttcggtgagtgagaagaag
ggcagaaatgacagatgggctgaggttgttccaattgataacatttccatccttcagaaa
ctccaaagtgaaccttgtgaagatggatattaccaatggaactcaactgtagattgtgta
tcctacggtaaaagtaagctgctcaacgaagcattttcttctgaagttgcatggttgctt
gtactgtccactctaaaggggatgagttttgacttgaagttggttcaaaataagttagtg
tcttttatcactaaaagctatcaagagtctgcaagtctatctaatctacagtcagatggt
gccacaaacataaccaattcaagttcccatgagacaataaagatcatgcgcttccagtgg
tccaatgagatactgaagcctaagattcagactgttgtcatggcaccttctgaggaaata
actcccgagaaagcaactgaggccaaccatcatgttgtcaatgttgaaagcgactcagaa
gttgagtttttatatgaacacacgagtttgagacattctaaacgattaaaagtggtccct
gatcgttttagtagctattcttcaccagattttggtcgctgtactaagaagattgtgata
gagggtataaatggaactgatgaaacttgtattccttttaaatctggggttttattagag
ggggatcttgattatgtggaattgcaacaacagaagttgttggagggaaaatctgcactg
cttcactcacggcattcttccaatctgcatgaaatgacactgataggcttacacaaaaga
ggtaaagatggaagtacggacccatcgtcaaatgaaattgaccatattcctctacatgta
tacaagagaagattcaaaaggaagaaattagcaaatccaaatgagtgcaaagaggtgata
gagaagtgcataggaaatattagaaatcaaattgagagacagtttgagcctattgtgcca
caggcagcttatcaaccaacagcttcaccaaaagaagaagaagaagaagattttaactgg
acaccattggctgatactccagcagaacaaaaagaacacgaagatttatggaaagagatg
gagcattctttgaccacacttgctcttcttgaacagaagcaggcagtgaacttcgaatcc
caaaccgaaggtactttcaattcagtggaatatggtgaagaaaaatgccaacatgattac
gagctgcatgatgagattggactaagatgtcggttatgcagctttgtttgcactgaaata
aagcatgtgtcaccaccatttttacaggtagatggttggaattcattcaaggagaaattt
gttgatcaaacactctggattgaacggtatgatctggaactgaacgctttaggagatgct
atttcctcgagggaaatttcgttatcagaaaggtgtgaaaatgtatggtccttgatagat
gatctccagtcaaaattacaccttcaccagaagaaagcttttgagtttatctggaaaaac
accactggatctttgaaacctgaagagatgaaccatttgtcagaaaatactggtggttgt
gtgatctcacattctcctggttcaggaaaaaccttgcttataattgcgtttattgtcagc
tacttgagactatttcctaaaagccgacccttggtacttgctcccaaatctgccatccat
acctggagcaaggaatttcagaaatgggggatttcagttcctgtttacctgattcaaagg
gaaaacaaatttagaacatcatccttcaggactagtatgccaagtaggaaaatgaggcaa
ataatggattctgttaaaaagctacaacaatggcatgaaaatccaagtattcttctaatg
aattattcatcattctttgccttgtcgaagcaatattcaaaactcgagcatattaggttc
gtggctgaagttctgcaaaaaagtcctgggattttgattctggatgagggtcacaaccca
agaagcaccaaatcaaaattacggaagctcttgatggaagtgaagactgaaaacagagtt
cttttatctgggacagtttttcaaaacaactttgaggaatacttcaacacactagctctg
gccagacctcgctttgttgacgatgttatcaatgagttggagccaaatatgctgaatctt
tttgatagaaataagcaaaagcaagcaaagacaaaaattcgcaaagaaagactggcaaga
aagcttttcatggaaaaagttggacaaaatattgaatcaaacaaagaacatgacagaaag
caagggtttggtttgttaaacaaaatcacaggtggatttgtcgatgtttatggcagtgaa
atattagatatgcttcctggcttggaaatttacactattatgttggcgtcaacagaactt
caacatgaaatgttgatgaagttacagaactcagtgccacacaaaagatacccacttgaa
ttggagatactggtcacagtatgttctatccacccatggttggtaaaatcagtgggttgt
gtgactagtttcttcagcgcagatgagttggagaccatcagtaaatgtagagaaaatttc
aggcttggttccaaagtaaattttgtgattgatcttgtgcacaaatccgatattcgaggg
gagaaggttttggttttttgtcacaatatctctccattgaactttctggttgatttgttt
aagcttatctttgggtggaacaaaggagaagaagtactggttctgcaaggcgatcaagag
ctccctctgcgtgcaaaaataatggacaagtttaacggtgatgtccatggcaaatgcaag
gttctgcttgcatcaaccacagcttgtgccgaaggcattagcttgactgcagcatccagg
ttggttatgttggactcagagtggaaccattccaagacaaggcaagcaattgctcgagca
ttccgaccagggcaggagaaagtggtctatgtgtatctgctattggcttcagggacttgg
gaagagggcaagtacaagagtaatgcacggaaggcttggatgtcgaagatgattttcctt
ggccgttacatcgaattttcctcttctagacaggtggaacatatcgatgatgaactcctg
agggagcttgtggaggaagatgagataaaaatgctgcagatgataatgagaccttcttaa
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