Musa acuminata (dessert banana): 135619143
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Entry
135619143 CDS
T03447
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mus01009
]
135619143
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
135619143
Enzymes [BR:
mus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
135619143
Protein phosphatases and associated proteins [BR:
mus01009
]
HAD phosphatases
Fcp/Scp phosphatases
135619143
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
135619143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
135619143
NCBI-ProteinID:
XP_064976926
LinkDB
All DBs
Position
BXJ2-8:10567660..10583152
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AA seq
949 aa
AA seq
DB search
MFNSAVYYENSLVGEVEVYPQNPNTGSWLREIRISHLSPSSERCPPLAILHTVASGGVRF
KMESKSPLSKDSPMSTLHATLFSENKTAVIALGEEELHLVAMASRKNPMPYACFWGFSVL
SRLYESSLLMLNLRCLGIVFDLDETLLVANTMRSFEDRIDALQRKISNETDPLRIAGMLT
EIKRYQDDKSILKQYAENDQVVENGKVFKVQSEMVPPLSDNHQLITRPVIRIQEKSIILT
RVNPSIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSSL
INSSKLLDRIVCVKSGSRKSLLNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVVPAFA
PYYAPQAEANSTIPVLCVARNVACNVRGGFFKDFDEGILPRISEVLYEDEMKDFPPAPDV
GNFLISEDDALTANANKDQVCLDGMEDAEVGKRLKEASCSMQAVQPMVTNFGPRPVSSLQ
NVPSSFNTTSLTAMRMAVPLPNNQCAQSVPVGRPLGQLASPEPSFQGSPAREEGEVPESE
LDPDTRRRLLILQHGQDTREPTPSFPVSPPLRVSIPPVQPQGSWFPLEEEIDPRQQDSAP
KEFSREPDPGRYRKRSRHPSFMHGGENSVPSDRVLHEPRRLPIQLRNGGDRLQLNNSLSN
FNSFQGEEMPMGRNFSRHKDAQLEPKQATIKQAGSPPGVLQEIAIKCRNKVEFRSTLCDT
AELQFSIEVWFVGEKLGEGVGKTRKEAQHRAADMSLRNLADKYLSNALGGPNTVHGDLLK
LPQTKEMGLLSDSNSYGYQPCPRNDLLPVASTSEDSRSMDQRLESSRRTSATTSLKELCV
MEGFDLVFRAEPSPSNGSISKGEVSAQVEIARQILGRGVGMSWEDAKLQAAEEALGTLRS
MLGQYSQKHSSSPGSLSMMSNKRFKPEVSHILHRIPPSGRYSKSETPVP
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcggcagtttactatgagaactcccttgttggggaggtggaagtttatccc
cagaatccgaacaccggctcatggctcagggagatccggatctcccatctctcgccttcc
agcgagcggtgcccgccgctcgccattcttcatacagtcgcctccggtggcgtccgcttc
aaaatggagtcgaagtcaccactgtccaaagattcgccgatgtccactttgcacgccacg
ctcttcagtgagaataagactgctgttattgcactaggtgaagaagagctgcacctggtg
gccatggcttccagaaagaatcctatgccatatgcttgtttctggggatttagtgtgcta
tcacgattgtacgaatcttctcttttgatgttgaacctaaggtgccttggtattgtgttt
gatcttgatgaaacacttctagttgctaataccatgcgctcattcgaggaccggattgat
gcacttcagcgaaagataagtaatgagacagatcctctgcgcattgctggcatgttaacg
gagataaagcggtatcaggacgataaatcaatcttgaaacaatatgcagaaaatgaccag
gttgttgaaaatggaaaggtgttcaaggttcaatcagagatggttccacctttgtctgat
aatcatcaattgattacacgtccagtaatacggatacaagagaaaagcatcattctaaca
cgtgtaaatccatctatacgagatacaagtgttcttgtacgattaaggcctgcatgggaa
gatcttcggagctatctaactgcaagaggacgcaaacggtttgaggtctatgtttgcaca
atggctgaaagagattatgctttggaaatgtggaggcttttagatccagattcaagcttg
attaactcttcaaaattacttgatcgtatagtttgtgttaaatcaggctcaagaaagtca
ctgctcaatgtctttcaagatggaatctgccatccgaagatggcacttgtaattgatgac
cgtctgaaagtttgggatgagaaagatcaaccaagagttcatgttgtccctgcttttgcc
ccatattatgctcctcaagcagaggcaaatagcaccatcccagttttatgtgttgcaaga
aatgttgcatgcaatgttagaggtggttttttcaaggattttgatgaaggaatactacca
cggataagtgaagttttgtatgaagacgaaatgaaggatttcccacctgctccagacgtg
ggcaattttttgatatcagaggatgacgctttaacagcaaatgcaaataaagatcaggtc
tgtcttgatggcatggaagatgctgaggttgggaagagattgaaggaagcaagttgcagc
atgcaagctgttcagcccatggttacgaactttgggccgagaccagtatcttctttacaa
aatgttccttcctcattcaacacaacctcactgactgctatgcggatggcagtgccatta
cctaataatcaatgtgctcagtcggttccagtaggtaggcctttaggtcaattggcctct
ccagaacctagctttcagggttctcctgctagggaagagggtgaggttcctgaatcagaa
ttagatccagacacaaggaggcgactactcatcttgcaacatggtcaagacacaagagaa
cctactccttcgtttcctgtaagccccccacttcgtgtctcaattcctcctgtacaacca
caaggaagttggtttccgttggaggaagagattgatccaagacaacaagacagcgcacct
aaagaatttagtagagaaccagatcctggacgttacaggaaacgatctaggcatccatct
tttatgcatggtggagagaactctgttccttctgatagagttcttcatgaacctagaaga
ttacccattcagttgcgtaatggaggtgatcgtttgcagctaaataattccttgtcaaac
ttcaattccttccaaggtgaggagatgcctatgggtcgaaacttttcaaggcacaaggac
gcacaacttgaacctaaacaggctaccataaagcaagcaggatctcctcctggagttcta
caggaaatagcaataaaatgtagaaataaggtggagtttcgaagcactctctgtgatacg
gcagaattgcagttttctatcgaggtttggtttgttggagaaaaattaggtgagggggtt
ggcaaaacaaggaaagaagcccagcatcgagctgctgatatgtcccttcggaatttggct
gataaatacttgtcaaatgctctgggtggccctaatactgtacatggagatctacttaag
ctccctcaaaccaaagaaatgggtcttttaagtgattcaaactcttacggctatcagcca
tgccccaggaatgaccttttgccagttgcaagtacctcggaagattctcgttccatggat
cagagattagagagctcaagaagaacatctgctactacttccctaaaagaactatgtgtc
atggagggtttcgatcttgtttttcgagccgaaccttcaccttctaatggatcaattagt
aaaggggaagtgtcagcgcaggtagaaatagcaagacagatcttggggagaggggttgga
atgtcctgggaagacgccaaactccaggctgccgaagaagctcttggaactttgaggtcc
atgcttggacaatattctcaaaaacactctagttcaccagggtcactgtcgatgatgtca
aacaagcgtttcaaaccagaagtttcacatatactgcatagaattccaccttctggaaga
tattctaaaagtgaaactcctgtgccttga
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