Musa acuminata (dessert banana): 135619200
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Entry
135619200 CDS
T03447
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135619200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135619200
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
135619200
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
HECT type E3
135619200
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
Arm
ARM_ARMC5
HEAT_EZ
PSP
HEAT_GCN1
MMS19_N
Motif
Other DBs
NCBI-GeneID:
135619200
NCBI-ProteinID:
XP_064977058
LinkDB
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Position
BXJ2-8:complement(11592206..11606155)
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AA seq
1893 aa
AA seq
DB search
METRSRKRAEASSSAPSSQPPAARRPSKRSRTNPPPPSTILTRSRRSRNSSPPLLPPPPS
GPMDSSAGDSSGRRRGSGKNHHPPAERDRDRDASDKGKEREPEASRSRDRDRARDRDAGR
ILGLNFDGGGADDDNDSEGGASALHQNLTSTSSALQGLLRKLGAGLDDLLPSSALLASSS
SQQSSRLKKILTGLRADGEEGRQVEALTQLCEMLSIGTEDSLGSFSVDSFVPVLVGLLNH
ESNPDIMLLAARALTHLCDVLPSSCSAVVHYGAVPCFCARLLTIEYMDLAEQSLQALKKI
SQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLIN
LLNYHDSKVLEHASVCLTRIAEAFASSPEKLDELCKHGLVAQAAGLISLSNSGGQASLST
STYTGLIRLLSTCASGSPLAAKTLLLLGISGTLKDILSGSGLVAGASVSPALTRPPEQVY
EIVNLVDELLPPLPQGTISTPIFYNITVKGSSIKKSTGITPGKPVEPGLATNDVSAREKL
LQEQPELLQQFGTDLLPVLTQVYASSVNGSVRHKCLAIIGKLMYFSSADMIQSLLSATNI
SSFLAGILAWKDPQVLIPALQIAEVLMEKLPGTFSKIFVREGVVHAVDALICPDTSSSIP
SQTSISEKDGDSAPVISSRSRRYRRRSGGLNTETGSVDESKRSLSVVGSPPNLFEIPPPS
SSLRASVSACAKSFKDKFFPAYPGATEVGVTDDLLRLKNLCTKLNSSVETVRTKGKGKSK
ASLVSSFDISSSIEEELDGAISEMLAELSKGDVSTFEFIGSGVVLALLSYLSCGTFGKEK
ISEANLPKLRKQALRRYRSFIATALPDEPKGGHTTPMTVLVQKLQNALTSLERFPVVLSH
LSRSTSGSARLSSGLSALSQHFKLRLCRAPGEKSLRDYSSNIVLIEPLASLAVVEEFLWP
RVKRIDSGQKSSASAGNSDSGSVATGAGTQLSSASTASGHRPSTRSRSSVAIGGPARNDA
AEGSSNSSKGKGKAVLKSTSEEARGPQTRKATRRRVASDKDAEMKPALSDSGSEDEMDMS
PVEIDALMIEEDVSDDEDDDHEEVELKDETLPVCVPEKVHDVKLDPADDAAVDPSASGSQ
AQPSSGSSDRAISTRDSESTELRSGNAFGSRGMSFAAAAMAGLASLSSRGIRGGRGTGAS
DNCNKLIFTAGGKQLSKHWTIYQAFQRQLVLDEEDDERFNGSDLPSDGSRFCNDVFTITY
QKADGQADRTSQGGSTSSMSKTPKSASASNSSCENRWQKKSLLDSILQADLPCDLEKTNP
TYNILALLRVLECLNQLTPRLRVQAVSDDFAEGKITGVDGLYRTGISVPPKEFVNTKLTP
KLSRQIQDALALCSGSVPPWCYQMTKACPFLFPFEIRRQYFYSTAFGLSRALHRLQQQQN
ADNPNSANEREVRIGRLQRQKVRVSRNRILDSAVKVMEMYSSQKAVLEVEYFGEVGTGLG
PTLEFYTLLSHDLQKVELGLWRSNYGSDNNVMQIDGGEMEDGKTDDGSVMKIHNDNFSVQ
RRDIIQAPLGLFPRPWSHNVGASDGSQFSKVLEYFRLVGQTMAKALQDGRLLDLPLSTAF
YKLVLGQELDLYDILSFDAEFGKTLQEMQVLVHCKQFMDATAGDSRKTTADLQFHGAPIE
DLCLDFTLPGYPDYILKGEESTVVNINNLEEYISLVVDAITNTGITRQMDAFRAGFNQVF
DISSLQIFCPHELDYLICGRRELWKPETLVDHIKFDHGYTAKSPAIVNLLEIMGEFTPEQ
QHAFCQFVTGAPRLPPGGLAALNPKLTIVKKHSSNLSNRTTNGTGATESADGDLPSVMTC
ANYLKLPPYSTKGIMYKKLLYAISEGQGSFDLS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacgcagccggaagcgggcggaggcctcctcgtcggcgccctcttctcagccc
cccgcggcccgtcgcccgtccaagcgctcccgcaccaacccgccgcctccctcgaccatc
ttgacccgctctcgtcgctcccgaaactcctcgccgccgcttcttcctccgccaccctcc
ggccctatggattcctctgccggcgactcctctggccgtcgccgtggctctggcaaaaac
caccaccctcctgcggagcgtgatagggatagggatgcctcggataaggggaaggagagg
gagccggaagcttcccggtccagggacagggacagggccagggatcgggatgcagggagg
atcttgggattgaactttgatggtgggggagctgacgatgataatgatagcgagggcggc
gctagtgctctccaccagaatctcacttcgactagcagtgcacttcaagggcttctcagg
aaattaggcgcagggctcgatgatctgctgccatcgtcggccttgttggcctcctcttct
tctcagcagagctcacggctgaagaagattttgacggggctgagggctgatggagaggaa
gggcggcaggtggaggccctgacccagctttgtgagatgctgtcaattgggactgaggat
tctcttggttcattctcggtggactccttcgtgcccgtgctcgtgggtctactcaaccat
gagagcaaccctgacattatgctacttgctgcaagggctctcacccacctctgtgacgtc
ttgccatcatcatgctctgctgtggtgcattatggtgctgtgccatgtttttgtgcccgt
ctcctcacaattgagtacatggacttagcagaacagtctctgcaagcactgaagaagata
tcacaagaacacccgactgcatgtttgcgtgccggcgcacttatggcagttctgtcttac
cttgatttcttctccacaggagttcagagagtagcattatcgactgcagcaaatatgtgc
aagaaacttccatcagatgcagctgactttgtgatggaagcagttccactgctgatcaat
cttcttaattatcatgattcaaaggtgctggaacatgcttctgtctgcttgacacgaatt
gcagaagcatttgcctcatctcctgagaaactggatgagttatgtaaacatggattagtt
gcacaagctgctgggctaatatctcttagtaattcaggaggacaagcctctctaagtaca
tcgacatacacgggtttaatccgactcttgtcaacatgtgcaagtggatccccactagca
gctaaaactcttctacttttaggaatcagtggcactcttaaagacattctctctggttct
gggcttgttgctggtgcttctgtttcacctgccttgacaaggccacctgagcaggtttat
gagattgtgaaccttgtggatgagcttcttcctcccttgcctcaaggaactatttctaca
ccaatattctacaatattactgtgaaaggatcatctataaagaaatccacaggcatcact
cctggtaaaccagttgagcctggtttagcaacaaatgatgtttcagcccgtgaaaagtta
ctgcaagaacaacctgaacttctgcaacagtttggaactgacttactccctgttctaaca
caggtgtatgcttctagtgtaaatggttcagtccgccacaagtgtctggctattatcgga
aagttgatgtatttcagctcagctgatatgattcaatctttacttagtgccacaaacata
tccagcttcttagcaggcattttggcatggaaagatccacaagtcttgatacctgctctt
cagatagcagaggttctgatggaaaagcttccaggtacattttccaagatatttgtgaga
gaaggggttgtccatgcagtggatgctttgatatgcccagatacctcaagttccattcct
tctcaaacatccatctctgagaaggatggtgattctgcacctgtaatatcttcacgttct
cggcgttatcggcgacgtagtggtggcttgaatacagaaactgggtcagtggatgaatca
aagcgttcactatcagttgtcggctcacctcctaatttatttgaaatcccacctccaagt
tctagtcttcgtgcttctgtcagtgcttgtgccaagtctttcaaagataaattttttcct
gcatatcctggtgcaactgaagttggagttacagatgatcttcttcgtttgaaaaatctt
tgcacaaaattaaattccagtgttgagactgtaaggacaaaaggcaaaggcaaatctaaa
gcctccttagtttcttcctttgatatatcatctagcatcgaggaagaattagatggagca
atatcagagatgttggctgaacttagcaaaggcgacgtgtccacttttgagtttattgga
agtggagtcgttctggcacttcttagttatttgtcttgtggaacatttggaaaggagaaa
atttctgaagctaacttgccaaagcttcgaaaacaagcactgaggaggtacaggtcattt
atcgcaactgctcttccagatgaaccaaagggaggacacacaactcccatgactgtgttg
gttcaaaagcttcaaaatgctttaacttcattggaacgttttccagttgtccttagccat
ttgtctagatctaccagtggaagtgcacgtctgtcatcaggtctaagtgccttgtctcag
cattttaagttgcgtttatgtcgagcaccgggtgagaaatctcttcgtgattactcatca
aatattgtacttatcgaaccactggcaagtctagcagttgtcgaagagttcctttggcca
agggttaagcggattgactctggacaaaagtcttctgcatcagcaggaaattctgattct
ggatctgtagctactggagctggtacccaattatcgtcagcatcaactgcttctggccat
cgcccttcaactagatctaggtcatcagtagcaattggaggtccagctagaaatgatgct
gctgagggaagttcaaattcttctaaagggaagggtaaggcagtcttgaaatctacatct
gaggaagccagaggacctcaaacaagaaaagctactcgtagaagagttgcttcagataaa
gatgcagaaatgaaacctgcacttagtgactctggatctgaggatgagatggacatgtct
cctgttgagattgatgctcttatgattgaggaggatgtctcagatgatgaagacgatgat
catgaggaggtggagctcaaagatgagactcttcctgtttgtgtaccagagaaggtacac
gatgtcaaattagatcctgctgatgatgcggctgttgatccttctgcaagtggtagtcag
gcacaaccttcatcaggttctagtgatagggctatctctacaagagactcagagtccact
gaactacgaagtggaaatgcttttggttcaaggggaatgtcatttgctgctgctgctatg
gctgggcttgcttctttaagcagcagaggtatcagaggtggtcgaggcactggtgctagt
gataactgcaacaaattgatattcacagcaggagggaagcagcttagcaagcattggacc
atttatcaagctttccaacgtcaacttgttcttgatgaagaggatgatgaaagatttaat
ggatctgatctacccagtgatggcagtagattctgcaatgatgtatttaccatcacatac
caaaaggctgatggccaggctgacaggacttctcaaggaggctccacttcttcaatgtca
aagactccgaaatctgcttctgcttccaattctagctgtgaaaataggtggcaaaagaag
tcactactggatagcattttgcaagctgatcttccttgtgatcttgaaaaaactaatcct
acgtataatatattggcattattgcgtgttttagagtgtctgaatcagctgactcctcgc
ctgagagtgcaagcagtaagtgatgattttgccgagggtaagattactggtgtggatggg
ctatataggactggtataagtgtccctccaaaagagtttgttaataccaagttaacgccg
aaactttcccgccaaattcaggatgctctggcattatgtagtggtagtgttcctccatgg
tgttaccaaatgacaaaagcatgcccttttctctttccctttgagatcagaagacagtat
ttctattctacagcttttggactatctcgtgcattgcatcgacttcagcaacaacaaaat
gctgataatcctaattcagcaaatgaaagagaggtccgcattggtcgactgcaaagacaa
aaggttcgtgtttctagaaatagaatcttggactctgcagtaaaagttatggagatgtat
tctagtcagaaggctgtccttgaagtagaatattttggtgaagttggaacagggttgggt
ccaaccttagaattttatactttgttgagtcacgatttgcaaaaggttgaattggggtta
tggagatccaactatggatcagataataatgtgatgcaaattgatggaggtgaaatggaa
gatggaaagactgatgatggttcagtaatgaagatacataatgacaacttttctgttcaa
agaagagatattatacaagctcctcttggtttgtttcctcgtccttggtcgcataatgta
ggtgcttctgatggtagccagttttcaaaggttttagagtattttcgtctggttggtcaa
acaatggcaaaagctctacaagatgggaggcttttggatctgccactttctacagcattt
tacaaacttgtattgggtcaagagcttgatttgtatgacatcttgtcatttgatgctgaa
tttggaaagacattacaagaaatgcaagttcttgttcattgcaaacagtttatggatgca
actgctggtgacagtcgaaagacaactgctgatttacaattccatggtgctccaattgaa
gacttatgtttagattttactcttcctggctatcctgattacatacttaaaggagaggaa
agcactgtggttaatatcaacaatttggaggagtacatttccttggttgttgatgctatt
actaatacaggaattacgaggcagatggatgcatttagagcaggattcaatcaggtcttt
gacatatcgtctttgcaaatattttgtccacatgaacttgactacctaatttgtggtcgc
agagaattgtggaagcctgagacgctggttgatcatataaaatttgatcatggatacaca
gctaaaagccctgcgatcgtcaatctgcttgagataatgggggaatttacaccagagcag
cagcacgcattttgccagtttgtgactggtgctccaaggcttccacctggtggcctggct
gcactaaatccaaagttgactatagtgaaaaagcattcttcaaatttatccaatagaaca
acaaatggaactggggcaactgagtcagctgatggtgacttacccagtgttatgacctgt
gctaactacctgaaacttcccccatactcaaccaagggaataatgtacaagaagcttctt
tatgctatcagtgaaggccagggatcatttgatctgtcataa
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integrated database retrieval system
