Musa acuminata (dessert banana): 135619430
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Entry
135619430 CDS
T03447
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135619430
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mus01002
]
135619430
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135619430
04121 Ubiquitin system [BR:
mus04121
]
135619430
Enzymes [BR:
mus01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135619430
Peptidases and inhibitors [BR:
mus01002
]
Metallo peptidases
Family M67
135619430
Membrane trafficking [BR:
mus04131
]
Endosome - Lysosome transport
Others
Others
135619430
Ubiquitin system [BR:
mus04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
135619430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
135619430
NCBI-ProteinID:
XP_064977504
LinkDB
All DBs
Position
BXJ2-8:37739847..37750564
Genome browser
AA seq
512 aa
AA seq
DB search
MKPSSGVIDISECAKRLDVDNQISLRHYYRIAHNLLKQADIYRSEKNIIDLFVMLLRFSS
LITETIPCHKDYQVVLQNEKLYFRKRLFDALNELEALKPDVQHLLEELNKRNRSQVNRLE
QIPQDGSLDDSFERPSFRRLTLKNNIVSQAHRTVVRDGFYRSPIVEGHKLLTNTKEDRFR
KLRSLRIPCLKEETLSRHSILGPNGLHGPWQPPSVDQGIQYPSNLDLTPIEIPSLLQPTE
NKPVTVKENDTLESERSMLEFLSLQENVTRQHEEQRRMINLDVSDVNPKMDIIKGLSPPP
AFAEVQDVVVAAQVSKSSNPQTVSLQNELIRAESPQEVHISTVLLESFMRLAKSNTVRNL
ETCGVLAGSLKNRKFYVTALIIPKQVATSNSCQTTNEEEIFDYQDKQSLFPLGWIHTHPT
QSCFMSSIDLHTHYSYQTLLPEAIAIVMTPKDGSRKYGIFRLTNPGGMSVIRRCPHRGFH
PHRQPSDGGRIYDHCSNVYMDPKLKFDVVDLR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttcctccggagtgatcgacatatcggagtgcgccaagaggctcgacgtggac
aaccagatctctctccgtcactactaccggattgcccataatcttctcaaacaggcagac
atttatcggagcgaaaagaatattattgatctttttgttatgctactgagattttcaagt
ttgattactgagaccataccgtgccataaagactatcaggtggtgctacaaaatgaaaaa
ctttattttagaaagagactgtttgatgccttgaatgaactagaagcgttgaagcctgac
gtacagcatctgcttgaagaactgaataagaggaatagaagccaagtaaatagattggaa
caaattccacaagatggttctcttgatgattcatttgagcggccatcgtttagaaggctg
acactaaagaataacatagttagccaggctcatagaacagttgtgcgagatggcttttat
agaagtcccattgttgagggacacaagctattgaccaacactaaagaagatcgctttcgg
aaattaagatctcttaggatcccatgcctcaaggaggaaaccctatcaagacactcaatc
ttgggtccaaatggtcttcatggaccatggcagccacccagtgttgatcaagggatacaa
tacccaagtaatttggacttgactccaattgagataccaagcctgcttcaaccaacagag
aataaacctgtgactgtgaaggaaaatgacactttggagagtgaaagaagtatgcttgaa
tttctttcactgcaagagaatgtaactcgacagcatgaagaacaacgtcgaatgatcaac
ttggacgtgtcagatgtgaatcctaagatggacatcatcaaaggactctctcctccgcct
gcctttgcagaagtacaagatgttgttgtagcagcacaagtttctaaatcctcaaatcca
caaactgtttctttgcagaatgagctaattcgtgctgaatctcctcaagaagttcacata
tcaacagttctgttggaaagctttatgagacttgcaaaatcaaatactgtcagaaattta
gaaacctgtggtgttcttgcaggttcccttaaaaacaggaagttctatgtgacagctctt
atcatccccaagcaggtggcgacatctaattcatgtcagacaacaaatgaagaagaaatc
ttcgactatcaggacaagcagtcactatttccccttggatggattcatactcatcctact
caatcatgtttcatgtcctcaattgatctacacactcactattcttatcagaccttgttg
cctgaggccattgcaatagttatgacaccaaaagatggatcaagaaagtatgggatattt
cggctgacaaatccaggaggcatgtcagtcataaggcgatgccctcatcgtggcttccat
cctcaccgacagccatcagatgggggtcgcatctatgaccactgctccaatgtctacatg
gaccctaaactgaagtttgatgtggtggacctccgatag
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