Musa acuminata (dessert banana): 135619511
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Entry
135619511 CDS
T03447
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
KO
K12883
nuclear cap-binding protein subunit 2
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
mus03015
mRNA surveillance pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135619511
09122 Translation
03013 Nucleocytoplasmic transport
135619511
03015 mRNA surveillance pathway
135619511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135619511
03041 Spliceosome [BR:
mus03041
]
135619511
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
135619511
Spliceosome [BR:
mus03041
]
Common components
Common spliceosomal components
Cap binding complex
135619511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
135619511
NCBI-ProteinID:
XP_064977672
LinkDB
All DBs
Position
BXJ2-8:42607084..42613849
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AA seq
247 aa
AA seq
DB search
MASLFKDPAKLSVYRDKRFRGNQEEYERALQASTTVYIGNMSFYTTEEQVYELFTRAGEI
KKIIMGLEKNTKTPCGFCFVLYYSREDTEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRELVDYGAGALGAFQPPTQYGKHGVY
GDSHRHGRDYRKRYREDEQSASEMSRRTSGYESRRNSEHDLRPEKNPRFRESGDSDDEDE
DDRKRRR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgttgttcaaggacccagccaagctgtcggtgtacagggacaagaggttccgg
ggcaaccaggaggagtacgagcgcgcgctgcaggcctccacgacggtttacatcggcaac
atgtccttctacaccaccgaggagcaggtgtacgagctcttcacccgggcgggagagatc
aagaagattatcatggggctggaaaagaacaccaagaccccctgcggtttctgcttcgtc
ttgtactattctagggaggatactgaggatgctgtgaaatatataagtggcacaatgctt
gacgaccggccaatacgtgtagattttgattggggattcgaagaaggcaggcagtggggt
cgtgggcgaagtggtggacaagtgagagatgaatatcgcactgattatgatcctggtcga
ggtggctatggaaaactggtccagagagagctggaagcacagagagaattggtagattat
ggtgcaggagcactgggtgcttttcaaccaccgacacaatatggtaagcatggagtttat
ggcgattcacatagacatggtagagattatcgaaaacggtatcgggaagatgagcaatct
gcatctgaaatgtcaagaagaacatcaggttatgaatcaaggaggaactccgaacatgac
ttgagaccggaaaagaaccctcggtttagggagagtggcgactctgatgatgaagatgaa
gacgacagaaaaagacgccgatga
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