Musa acuminata (dessert banana): 135619714
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Entry
135619714 CDS
T03447
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
135619714
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135619714
Spliceosome [BR:
mus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135619714
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Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
AAA_22
MCPsignal
AAA_16
Motif
Other DBs
NCBI-GeneID:
135619714
NCBI-ProteinID:
XP_064978056
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All DBs
Position
BXJ2-8:46127983..46154034
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AA seq
1169 aa
AA seq
DB search
MLSLALPLPCSSSSPACLFDSFLPPTSRRRYRFRRFLSPQSAVSPRARLHLVPLCANPLG
SASPIREQLSDTDEDEEDDDDDEVAAMEYDDGLLADVDREEEEREGETAQLEAEAGPSAK
FEEHKWERVTRLLAEVREFGEEIIDYEELAGIYDFPIDKFQRLAIQAFLRGSSVVVSAPT
SSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRRTFGDAYVGLLTGDSAINKE
APILIMTTEILRNMLYKSVGMISSASRLFHVDVIVLDEVHYLSDISRGTVWEEIVIYSPK
EVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLTWHFSLKNSLLPLFDEKGKR
MNRKLSLDYLQTSISRGEHFNESKTKKHRMGKVERGYSNVARLSQQTPLSKNDMNYIRRS
QVPQIKDTLWHLAERDMLPAIWFIFSRRGCDAAVQYLEDCKLLDECEAGEVELEYRRFKK
QYPDAVREVAVKGLLHGIASHHAGCLPLWKSFVEELFQRGLVKVVFATETLAAGINMPAR
TAIISSLSKKGETGRTFLSPNELFQMAGRAGRRGIDEVGHAVLIQTPYEGAEECYELLSA
GLEPLVSQFTASYGMVLNLLAGAKVTRKLHDPDGTKLSHCGRTLEEARKLVEQSFGNYVG
SNVMQAAKEELEKIQHEIELLSVEVTEDAIDRKCQEQLSENDYAEISKLQEELRAEKRTR
TELRRQMEIKRMAAWRPLLDKFGSGNLPFICLRYKDKEGVQHNIPAVYVGKLSSSSVQKI
MNMVKLDSSDFDNLETGSRDVASHEDGKPAYYVALSSDNSWYLFTEKWLKTIYRTGFPNI
SSLDGDILPREMLRNLLIKEDLQWEKIADSEFGSLWSIGGSLETWSWSLNVPVLSSLSED
DEVANQSEAYRDAVGRYKEQRSRVSQLKKKITNTKGFKEFKKIIDMTKFIKEKMERLNAR
SNRLSKRIGQIEPTGWKEFLQISKVIQEARALDLSTQVIYPLGETAAAIRGENELWLAMI
LRNKVLLNLKPAQLAAVCGSLVSEGIKVRPWKSNSYIYEPSSIVIDVIYLLEEQRISLIQ
IQDKYGVKIPCELDGQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPK
LPDIDPLLQNNALLASSVMDRAPINELAG
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgctctccctcgctttaccgctgccttgctcttcttcctctcctgcttgcctcttcgac
tccttccttcctcccacctctcgccgtcgctaccgattccgccgtttcctcagtccccag
tccgccgtttctccaagagcgaggctgcatcttgtccctctctgtgcgaaccctttaggc
tctgcttctccaataagggagcagttatctgatacggacgaggatgaagaagacgacgac
gatgacgaagttgctgccatggagtacgatgatgggctgctggccgatgtcgaccgggaa
gaggaggagagagaaggtgagactgctcagcttgaggcggaggcggggccatctgctaaa
ttcgaggaacacaagtgggaaagagtgaccaggcttcttgctgaagttagggagtttggt
gaagagattattgattatgaggagctcgcagggatatatgacttcccaattgataaattt
cagcgtttagctattcaagcattcttgagaggctcatctgttgttgtttctgcgccaaca
agcagtgggaagactttaattgctgaagctgctgcagtagccaccgtagccagaggaagg
aggcttttctacacaacacctttgaaggctctgtcaaatcaaaagtttcgtgatttccgg
aggacatttggtgatgcttatgttgggcttctaaccggagattctgctatcaacaaagaa
gcaccaatactaatcatgactacggagattttacgcaacatgctctataaaagtgtagga
atgatttcttctgcaagtagattgtttcatgttgatgtgatagttttggatgaagtgcac
tacctaagtgatatatctcgggggacagtctgggaagaaatagttatatattccccaaaa
gaagtccagcttatttgtctttcagctacagtagcaaatcccgatgaattggctggttgg
atagggcagattcatggtaaaacagagttggtaacatcgacaaaacgaccggtcccactt
acttggcacttctcgctgaagaactctctgctacctctttttgatgagaaagggaaaaga
atgaataggaagctctcactggattatttgcaaacatccatttcaagaggtgaacatttc
aatgaaagcaaaactaagaagcacagaatgggcaaggttgaacgaggttatagtaatgtt
gctcgtctctcacaacagacaccattgtcaaaaaatgatatgaactatattcgccgttca
caggttcctcagattaaagataccttatggcaccttgcagagcgggatatgcttccagct
atttggtttatttttagtagaagaggatgtgatgctgctgttcagtatcttgaggattgc
aagcttttagatgagtgtgaggctggtgaagtcgaacttgaatataggaggtttaagaag
cagtatcctgatgctgtcagagaagttgctgtgaaaggtctcttgcatggaattgcctca
catcatgctggatgcctgcctctgtggaaatcatttgttgaggaattgtttcagcggggt
ctagtaaaagttgtttttgctactgaaacacttgctgctgggataaatatgcctgctaga
acagctataatctcctcacttagcaaaaagggtgaaactggacgcacatttctaagccca
aatgaactgttccaaatggcaggacgtgctggtcggagaggcattgatgaagtgggtcat
gctgttcttatacagactccctatgaaggagctgaggagtgctatgagctactttctgct
gggcttgaacctcttgtttcacaatttactgcttcatacgggatggttttgaatctcctt
gctggtgcaaaggttactcgtaagcttcatgatccagatggtacaaaactttctcactgt
ggacgaactctggaagaagctcgaaagctagtggagcaaagctttggaaattatgttggc
agtaatgttatgcaagctgccaaagaagagcttgaaaaaatacaacatgaaattgagttg
ctttctgtggaagttactgaagatgctattgatagaaaatgccaggaacagttatctgag
aatgattatgctgagatctctaaactgcaagaagaattaagggctgagaaacgaacaagg
actgaactcagacgacagatggagatcaaaagaatggctgcttggagaccgcttttagat
aagtttggaagtggaaaccttccatttatttgtttgcgatataaagacaaggaaggagtt
cagcacaatatacctgctgtatatgttggaaaacttagctcttcttctgtccagaagatc
atgaatatggttaagttggattcttctgattttgacaacttggagacaggttctagagat
gttgcaagtcatgaagatggcaaaccagcatattatgtggctttgagttcagataactca
tggtatctctttacagaaaaatggttaaaaacaatatatagaacagggtttccaaacatc
tcatcacttgatggtgatattctaccacgagaaatgttgaggaaccttctcatcaaggaa
gatctgcagtgggaaaagattgctgattctgaatttgggtcattatggtccattggaggt
tctcttgagacatggtcatggagtttaaatgttcctgtattgagtagcctttcggaggac
gatgaggtggcaaatcaatctgaagcataccgagatgctgttggacgttacaaggaacaa
agaagcagagtctctcaattgaagaaaaagataacaaataccaaagggtttaaagaattt
aagaagatcattgatatgaccaagtttataaaagagaaaatggaacgcctgaatgctaga
tcaaatcgcttaagtaaacgaataggacaaattgagccaactggttggaaggaattcttg
cagataagcaaagtaatacaagaagcaagagcattggatttgagcactcaggttatatac
cctttaggtgaaacagcagcagcaattcgaggagaaaatgagctatggcttgcaatgata
cttaggaataaagtcttattaaacctgaagccagcacaactcgctgctgtatgcggaagt
ttagtttcagaaggaatcaaagtgcgaccttggaaaagtaacagctatatttatgagcca
tcctcaattgtgattgatgttatctaccttttggaggagcagagaatatctcttatccaa
attcaggataaatatggcgtcaagataccctgtgagttagacggtcagttctctggaatg
gttgaagcctgggcctctggtctaacttggagagaaataatgatggactgtgctatggat
gagggggacctagctagactattacgtcgtacaatagatttattggcacagattcctaag
ttgccagatattgatccacttctacaaaacaatgcgctgcttgcatccagtgtcatggac
cgagcacccataaatgaacttgcgggttga
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