Musa acuminata (dessert banana): 135620041
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Entry
135620041 CDS
T03447
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
135620041
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135620041
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
135620041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
DEXQc_Suv3
AAA_19
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
135620041
NCBI-ProteinID:
XP_064978709
LinkDB
All DBs
Position
BXJ2-8:50132409..50176074
Genome browser
AA seq
2083 aa
AA seq
DB search
MLIPLPRLTSSFRGPYDVDEAYLRRKRILESLKSRRTNDEPELARKLIPRWDEASDALRQ
TYRQYVGSVIELINGEVTSEEFREVAKSAYDLFGRPDIDSSITKIIQEKKIELQQLVGYN
IQDTVLLKVASLAQRIYALQNTSSEAVIGQDLGADEHGDNRGEFGSNLSFHAPSRFIVDV
PLENGASLTSDFQFKTASFDANRNGHMAYIDHNLTADLKTINLRWLKDACDLIVKNGASQ
LSGDELAMALCRVLLSDKAGDEIAGDLLDLVGDGAFETVQDLLSHRKELVEAIQHGLLML
KSEKMSSNSQPKMPSYGTQVTIKTESERQIDKLRRKEEKRNKRVGEYGGTLDFPVESFSS
LLLASEKKQPFDDLIGAGQGINSILVSALPQGTTRSHRSGYEEVRIPPTPTAAMRPDEKL
IEIKELDDFAQAAFRGYKSLNRIQSRIYQTTYHTNENILVCAPTGAGKTNIAMIAILHEI
KQNFKDGFLHKDEFKIVYVAPMKALAAEVTATFSHRLSPLNLVVKELTGDMQLSKNELEE
TQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGSVIEALVARTLRQVEST
QSMIRIVGLSATLPNYLEVAQFLHVNPESGLFFFDSSYRPVPLSQQYIGISEKDYSKKNL
LFNSICYDKVLDSIKQGHQAMVFVHSRKDTGKTARTLIELALKAGDLELFMNDKHPQFPL
VKKEVTKSRNRELVELFESGFGIHHAGMLRSDRALTERLFSDGLLKVLVCTATLAWGVNL
PAHTVIIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIILTTHDKLAYYLR
LLTSQLPIESQFISSMKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKTNPLVYGISWD
EVIGDPSLASKQRSLIIDVARALDKAKMMRFDEKSGNFYCTELGRIASHFYLQYSSVETY
NEMLRRHMSDSEVINMVAHSSEFENIVVREEEQDELENLSKMSCPLEIKGGTTDKHGKIS
ILIQVYISHGSIESFSLISDAAYISASLGRIMRALFEICLRRGWCEMSSFMLQYCKAVDR
QIWPYQHPLRQFDRELSAEVLRKLEERGTDLDRLYEMEEKDIGALIRYAPGGKLVKQFLG
YFPSISLSATVSPITRTVLKVDLLITPDFVWKDRFHGTAERWWILVEDSENDHIYHSELF
ILTKKMARAEPQKISFTIPIFEPHPPQYYIRAVSDSWLYAESLYTVSFHNLTLPETQVSH
TELLDLKPLPVSSLGNEAYENLYNFSHFNPIQTQSFHVLYHLDDNVLLGAPTGSGKTISA
ELAMLHLFNTQPDMKVVYIAPLKAIVRERMNDWKKRLVSQLGKKMVEMTGDFTPDLMALL
SADIIISTPEKWDGISRSWQSRSYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQ
TERSVRFVGLSTALANARDLADWLGIGENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMN
SMNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDLIQLAASDESPRQFLNIPEASLEMV
LSQITDNNLRHTLRFGIGLHHAGLNDRDRSLVEELFSNNKIQILVCTSTLAWGVNLPAHL
VIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYE
PFPVESNLREHLHNHINAEVVSGTISHKEDAVHYLTWTYLFRRLVRNPSYYGLEDTEAST
LNSYLSRLMQDTFEDLEDSGCIKMNENSVEPLMLGSIASQYYLSYMTVSMFGSNIGPSTS
LEVFLHILSAASEFDELPVRHNEENINKTLAEKVPHMVDEHHLDDPHVKANLLFQAHFSR
IELPVTDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSTMTCMHLLQMVMQGLWFGKDSS
LWMLPCMNEDILNHLNNIGILSLQDLLELPKAKFQQMLQRYPASELYQDMQYFPRVRVKL
KLHTGDDNASKSAVLNIRLEKANSKHSTVRAFVPRYPKVKDEAWWLVLGNATTSELYALK
RISFSDQMVTRMALPPTVTNLQDTKLFLVSDCYLGFEQEYSIS
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgctgatccccttgccgcggttgacgagctctttcagaggcccctacgacgtcgacgag
gcgtacctccgccgtaagaggatcctagaaagcctaaaatcgagaaggactaacgatgag
ccggaacttgcaagaaagctgattcctcgctgggatgaagcttcagatgcattgcgccaa
acatacagacaatatgttggttctgttattgagttgataaatggtgaggtgacctcagag
gaatttcgggaagtggcaaaatctgcttatgatctttttggtcgccctgacatcgatagt
agtatcactaagatcatccaagagaaaaaaatcgagttgcaacaacttgttggttataat
attcaagatacagtcctactgaaagtggcttctctagctcagaggatttatgctcttcag
aatacttccagtgaagctgtaattggccaggatttaggggcagatgaacatggagacaat
cgtggcgagtttggctcaaaccttagtttccatgctccatctcgctttattgtcgatgtg
ccattggaaaatggtgcatccttgacaagtgattttcaatttaagactgcttcatttgat
gccaatcgtaatggtcacatggcgtatattgatcataatttaactgctgacctaaaaact
atcaatttaagatggctgaaggatgcatgtgatctcattgtaaagaatggtgcatcacag
ctatctggagacgaacttgctatggccttatgccgggtgcttctatctgataaagctggt
gatgagatagctggtgatcttctggaccttgtcggcgatggtgcctttgaaacagtacaa
gatctattgtcgcatcgcaaagaacttgttgaagccattcagcatggattacttatgttg
aagtctgagaaaatgtcttcaaacagtcaacctaagatgcctagttatggcacccaggtt
actataaaaactgaatctgaaaggcaaattgataaacttcgtcgcaaggaggagaaacgt
aataaacgggtgggagaatatggagggacacttgattttcctgttgaaagcttttcttct
cttcttttggcaagtgagaagaaacaaccttttgatgacttaattggagctggtcaaggg
atcaattctattttggtcagtgctcttcctcaaggaactacaagatcacatcgtagtggc
tatgaagaagttagaattccacccactccaactgctgctatgagacctgatgagaagctg
attgaaattaaagaactggatgattttgctcaagctgctttccgtggatacaaatccttg
aaccgcatccagagtcgtatataccaaacaacatatcatacaaatgaaaacattcttgtt
tgtgcaccaacaggtgctggaaagacgaacattgctatgatagctattctccatgagatc
aaacaaaacttcaaggatggatttttgcacaaagatgaattcaaaatagtatatgtggct
ccaatgaaggctttggcagcagaggtgactgccacattcagtcaccggttatctccccta
aacctggttgtaaaagaacttactggagacatgcaattgtcaaagaatgagctagaagag
actcagatgatagtgacgacgcctgagaaatgggatgttattactcgcaaaagcagtgat
atgtcattgtcaatgctggttaagctcttaattattgatgaagtacatctgctgaatgat
gacagaggctcagtaatagaagctcttgttgctcgaaccctccgacaagttgagtcaaca
caatcaatgatacgtattgtgggtttatctgccaccttaccaaattatttagaggttgca
cagtttttacatgtaaatccagaaagtggactgttcttttttgattcaagctatcgtcca
gttcccctatctcaacagtatattgggatcagtgagaaagattattctaaaaagaatctt
ctattcaattcgatatgctatgacaaggtcttggactcgataaagcaaggacatcaagca
atggtttttgttcattcacgcaaggacactgggaaaactgcaagaactttgattgagtta
gcgttaaaggctggtgacttggagttatttatgaatgataaacatcctcaatttcctttg
gtcaagaaagaagttactaaatccagaaatcgagaacttgttgagttatttgaatctggc
tttggtattcatcatgctggtatgcttcgttcggatagagccctgactgagcgtcttttc
tctgatggtctacttaaagttcttgtatgtactgcaactttggcgtggggagtaaatttg
ccagctcatacagtaattatcaagggcacacaactgtatgatcctaaggctggtggatgg
cgggacttgggtatgcttgatgtcatgcagatctttggtcgtgctgggagaccacagttt
gacaagagtggtgaaggcatcatacttacaactcatgacaaactggcttattatttgaga
ttgttgacaagccaactcccaatagaaagtcagtttattagctcaatgaaggataacttg
aatgctgaggtagcattaggaaccgtaacaaatgtcaaagaagcttgtgcttggcttggt
tatacgtatttatttatacggatgaagacgaatcctctggtgtatggaatatcatgggat
gaggtcattggtgatccttctttagcctccaagcaaaggtctcttataattgacgttgca
cgtgctcttgacaaagcaaaaatgatgcgctttgatgagaaaagtggcaatttctactgc
acagagcttggccgcatagccagccacttttaccttcagtattccagtgttgagacttac
aatgagatgcttaggcgccacatgagcgacagtgaagttattaatatggtagcccattct
tctgaatttgagaacattgttgttagagaggaggaacaggacgaactggaaaatctatcc
aaaatgtcatgcccattggaaataaaaggtggaacaactgacaagcatggaaaaatttca
atccttattcaggtgtacatttcacatggttcaattgagagcttctctctaatctcagat
gctgcatatattagtgcaagcctgggtcgcattatgcgtgctctatttgagatttgtttg
cggaggggatggtgcgaaatgtcatctttcatgttgcaatattgcaaggctgttgatcga
caaatttggccttatcaacatccacttagacagtttgaccgagagctttcagcagaagta
ttgagaaaacttgaagaaagaggcacagacttggaccgtctatatgagatggaagagaaa
gatattggcgctttaattcgttatgctcctggtggaaagttggtcaagcaattcctgggt
tactttccgagcatcagtttatctgctactgttagcccaattaccagaacagttttaaag
gtagatctgcttataactccagactttgtttggaaggaccggtttcatggtactgctgag
cgctggtggatccttgttgaggattcagagaatgaccacatttaccattcagaactcttt
atattgactaagaaaatggcaagggctgaaccacagaagatttcatttactattccaata
tttgaaccacatccaccacagtactacattcgtgctgtgtctgattcttggttgtatgct
gagtcactttatactgtatccttccataatcttacactgccagagacacaagtatcacac
acagaacttctagatctgaaacctcttcctgtaagttctcttggaaacgaagcttatgaa
aacctgtacaatttttcacacttcaatccaatccaaactcagtctttccatgtcctatac
cacttggatgacaatgttctcttgggagctccaactggtagtggaaagaccatatcagct
gagcttgcgatgctgcatttattcaacactcaaccagatatgaaggtggtctacatagct
cctctcaaggcaattgttcgagaaagaatgaatgactggaagaaacgtcttgtctcccag
cttgggaagaaaatggttgagatgactggcgacttcactccagatcttatggcactattg
tcggctgatattattatttctactcctgaaaaatgggatgggattagtcgcagctggcaa
agtcgcagttatgtaatgaaggtcgggctaatgatattggatgaaatacatttattggga
gctgatcgaggacctattcttgaggtcattgtttctaggatgcgatacatttcctcacaa
acagagcgctcagtacgctttgttggtctgtcaacagcattagcaaatgctcgtgatttg
gctgactggttgggtattggagagaatggtctattcaatttcaaacctagtgtccggcct
gtacctcttgaagttcacattcagggttatcctggcaagttttactgtccgaggatgaat
agcatgaacaaacctgcctatgctgccatatgtacccattcacctgcaaaacctgttctt
atttttgtctcctcacgccgtcagacaagacttactgcacttgatctcatccagcttgca
gcatcagatgaaagtccaaggcaatttcttaatattccagaagcatcccttgaaatggtt
ctttcacaaatcactgacaacaacttaagacatacactacggtttggaattggactgcac
catgcaggactcaatgaccgagaccgatcattggttgaagaacttttttctaataacaag
attcagatacttgtatgtacaagcacattagcatggggtgtgaatcttcctgcccatctg
gtcatcattaagggtactgaatactatgatggaaaagcaaagagatatgttgatttccct
attactgatattttgcaaatgatgggccgtgccggtcgtccacaatatgatcagcatgga
aaggctgtaattctggttcatgaaccaaaaaagagcttctataagaagtttctttatgaa
ccattccctgttgaaagtaatctgagggaacatttgcacaaccatattaacgctgaggtt
gtttcgggcacaatcagtcataaggaggatgcagtacattatctaacttggacttaccta
tttcgtcgactggttaggaatccatcttattatggactagaagatactgaagccagtact
ttgaattcttatctctcaaggttaatgcaagatacatttgaggaccttgaggatagtggg
tgcattaagatgaatgaaaattctgtggagcctttgatgttgggctccatagcatctcaa
tattacctgagctatatgacagtgtcaatgtttgggtcaaacataggtcccagtacttca
cttgaagtgtttttgcatattctttctgctgcttctgaatttgatgagcttcctgtacga
cataacgaggaaaatatcaataaaacactagctgaaaaggtgccacacatggtggatgaa
caccaccttgatgatccacatgtgaaagcaaatttactctttcaggcacatttctctcga
atagaattgccagtcactgactatgtcacagacttaaaatctgttcttgatcaaagtata
cgcatcatacaagcaatgatagatatatgtgccaacagtggatggctctcaagcacaatg
acttgtatgcatcttttgcagatggtcatgcagggtttatggtttggaaaagattcatcg
ttgtggatgttaccatgcatgaatgaggatattctgaaccatctgaacaacataggcatc
ttgtcattgcaagacctattggaacttcctaaagcaaagttccagcaaatgctccaaaga
tatcctgcctcagagttgtatcaggatatgcagtattttccacgtgtcagagtgaaattg
aagcttcacactggagatgataatgcatcaaagtctgcggttcttaacatcagacttgaa
aaggcaaattctaagcattctacagtgagagcttttgtccctcgatacccgaaggtcaaa
gatgaagcatggtggttagttcttggtaatgccactacgtcagaattatatgctctgaaa
agaattagtttctcagatcagatggtcactcgtatggcgttaccaccaacggtgaccaat
cttcaggatacaaagctgtttttagtatcagattgttatcttggatttgagcaggaatac
tccatcagctaa
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integrated database retrieval system
