Musa acuminata (dessert banana): 135620109
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Entry
135620109 CDS
T03447
Name
(RefSeq) protein CHROMATIN REMODELING 5-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
135620109
03036 Chromosome and associated proteins [BR:
mus03036
]
135620109
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
135620109
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
135620109
SLIK complex
135620109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
135620109
NCBI-ProteinID:
XP_064978846
LinkDB
All DBs
Position
BXJ2-8:complement(51066246..51096985)
Genome browser
AA seq
1731 aa
AA seq
DB search
MAFFRNYNSKINSGHNLDEKVEEDRPAEDYNSVGNRNVDVNVNYNDADMTGDANQNEEEQ
FNTGRLQIDNSEGDASGKLGKRAAPTGAWGSKFWKVCQPMSDSGDAEYDHNDLGEDAGDN
YSEDSNGQKDRRQSQREHVEVPAEEMLSDDYYEQDGEEQSDSLHGSGPSHLNVAGSRLLT
QPVSVSKSIAKGAKVARHEEYNDDGDDDDDYDEDDEEEEDDPDDADFEPESSDTGKGRKS
KEKASDSDDFEDDNEDDIDLSEEDDNDYFDNRRRRMPRKVGQSLKQKDTKPSVNIRRKRG
RTFSDEEYHSSGNDLEEDSEEDLSRKARSSSQSRKRGGGNSTMTANTNLISSELRTSGRL
VKKVSYAESEESEDIDEEKSNKFQKEDAEEDDGDSIEKVLWHQPKGTAEDAMRDNRSTQP
VVFSSISDSEPVWDDVEFYVKWKGQSYLHCEWKSFADLQNLSGFKKVLNYIKRATEERRH
KKALSREEIEVHDVSKEMELDLLKQYSQVERIFADRISKIGGDDVVPEYLVKWQGLSYAE
ATWEKDTDIAFAQDAIDEYKVREAATTVQGKTVDFQRKNSKASLRRLDEQPEWLKGGKLR
DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIQGPFLVVVPLSTL
SNWAREFKKWLPEMNIVVYVGNRASREVCQQFEFYTNRKSGRNIKFDTLLTTYEVILKDK
VVLSKIRWNYLMVDEAHRLKNSEASLYTTLLEFNTKNKLLITGTPLQNSVEELWSLLHFL
DPEKFINKDDFVEKYKNLSSFNEIQLANLHKELRPHILRRIIKDVEKSLPPKIERILRVE
MSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDNG
TSDINKVERIVMSSGKLVILDKLLIRLRETNHRVLIFSQMVRMLDILAEYLSFRGFQFQR
LDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ
AMSRAHRIGQQEVVNIYRFVTSRSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKETKK
GSSMFDKRELSAILRFGAEELFKEEKDDEDNKRLETMDIDEILERAEKVESKEPDGEEGN
ELLSAFKVANFCSAEDDATFWSRLIQPEAQDQVDAALAPRAARNIKSYAEHEQPEKSTKS
KKSVVDSREKTQKRSSKAADALVHSLPIIEGAAAQVREWSFGGLPKKDASHFVRAVKRFG
NPRQIDLIVAEVGGVVEAALPEAQIELFDLLIDGCREAVSGGNIDAKGTLLDFFGVSVKA
HEFLNRVEELQLLAKRIGRYKDPVSQFRLVTQHKSPQWSKSCGWNSVDDARLLLGIYYHG
YGNWEKIRLDPSLGLTKKIAPITLGERETFLPRAPNLDNRASALLQKEFASINGKSKVKG
SRKVVNEGENVSKLSGSRVRDVNMKAGLSKLNSREKDRFQKLKVEPQVKEEGEISDSEQE
RYQKLKEEKWMEWCADVMEEEEQTLKRLQRLQTTSIDLPKEKVLLRIRRYLQLIGRKIDN
IVQQHEVSYKQSRMTMRLWNYVSTFSNLTGERLHEIYSKLKEEQNDAGVGPSYINSYGTL
NSNQFPTLNNDLQRRQRPYQHSSQPSEAFHRNQSTGKSEAWKRRKRSEMDNQLLIHSHCQ
PDMMSNGVRLNEQTNSAGILGKGPVEMRRYPNDRPNRAHPGRFPPGQGHMS
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atggcattcttcaggaactataatagcaaaataaattctggacacaacctcgatgagaag
gtagaggaggatagaccagctgaagactataattctgtagggaatagaaatgtggatgtc
aatgtcaactataatgacgctgacatgacaggagatgctaatcagaatgaggaagaacaa
tttaatactggcagactgcaaattgacaactctgaaggagatgcaagtgggaagcttgga
aagagagcagctcctaccggtgcatggggctcaaaattttggaaggtctgccaaccaatg
tctgattctggggatgcagagtatgatcataatgatttaggtgaggatgctggagataat
tattcggaagattcgaatgggcagaaagataggagacagtcccaaagagaacatgtagaa
gtaccagcagaggaaatgctctctgatgattactatgagcaggatggcgaggaacaaagt
gactccctacatggcagcggaccgagccatctaaatgtagctggttccaggttactaaca
caaccagtttctgtcagtaagagcatcgcaaaaggtgccaaagtggcgaggcacgaagaa
tacaatgatgatggtgatgatgatgatgattatgatgaagatgatgaggaagaagaagac
gatccagatgatgctgattttgagccagagtctagtgatacagggaagggcagaaaaagc
aaggaaaaagcatcagacagtgatgattttgaggacgacaatgaagatgacattgatctc
tctgaggaagatgataatgattattttgataatcgacgaagacgaatgccacgtaaagtt
ggacaaagtttgaaacagaaagacactaaaccttctgtaaatatacgacgaaaaagaggc
agaactttttcagatgaagaatatcattcatcaggaaatgacttagaagaagatagtgaa
gaagacctcagtcgtaaggcaagaagttcatctcagtcacgcaagagaggtgggggcaac
tctaccatgactgcaaataccaatcttatcagcagtgaacttcggacgtctggtaggttg
gtaaaaaaggtttcttatgctgaaagtgaagaaagcgaggatattgacgaggagaaatca
aacaaatttcaaaaggaggatgctgaggaagatgatggtgattcaattgaaaaggtgctt
tggcaccagcccaaaggtacggctgaagatgctatgagggacaacagatcaacccaacct
gttgtatttagtagtatttcagactccgaacctgtttgggatgatgttgagttttatgta
aaatggaaaggacaatcatatcttcactgtgaatggaaatcatttgccgatctccaaaat
cttagtggattcaagaaggtacttaactacataaaaagggcaacggaggaaagacggcac
aaaaaggccttgtcacgtgaggagattgaagttcatgatgttagtaaggaaatggagtta
gaccttctcaagcaatacagccaggtagaaaggatatttgcagataggatcagtaaaatt
ggtggtgatgatgtggtaccagagtatttggtcaagtggcaaggactttcttatgctgaa
gcaacttgggaaaaggatactgatattgcttttgctcaggatgcaattgatgaatacaag
gttcgtgaagctgccacaactgtacaaggaaaaacggtcgattttcagcggaagaatagc
aaagctagtctgcgaaggcttgatgaacagcctgaatggctgaaggggggcaaacttcgt
gattatcagcttgagggattgaatttcctggttaacagttggagaaatgatacaaatgtt
attttagctgatgaaatgggccttggtaaaactgtccagtcagtttcgatgttaggattt
ctacagaatgctcaacagatacaagggccttttcttgttgttgtacctctctcaacacta
tcaaactgggcacgagaatttaaaaaatggcttcctgaaatgaatattgttgtgtatgtt
ggaaatcgtgctagcagagaggtttgtcaacaatttgagttttacacaaatagaaagagt
ggcagaaatatcaagtttgacacattgttaactacatatgaagtgatattaaaagataag
gtggtattatctaaaattagatggaactaccttatggttgacgaggcgcacagactaaaa
aatagtgaagcatcattatacactactctcctggaattcaacaccaaaaacaaactcctt
attactggtacaccactgcagaacagtgtcgaggaattatggtcccttctgcattttctt
gatcccgaaaaatttattaacaaggatgattttgttgagaaatacaaaaatctgagctcc
ttcaatgaaattcagcttgccaatctccataaggaattgaggccacacattcttcgaaga
atcataaaagatgtggagaagtccttacctccaaaaattgaacgcattcttagggtggaa
atgtctcctcttcagaagcagtactataagtggattttggagcgtaattttcacaatcta
aacaaaggagttcgtggaaatcaggtttcacttttaaatattgttgttgagttgaagaaa
tgctgcaaccatcctttcttgtttgagagtgctgatcatggttatggtggagataatggc
actagtgatattaataaagttgagcgaatagttatgagcagcgggaaattagtaattctt
gacaaactacttattaggttgagagagacaaatcatcgtgtattaatattctcacagatg
gttagaatgttggacatacttgccgagtatttatcttttaggggattccaatttcagagg
cttgatggtagtacgagagctgatcttcgtcaccaggccatggaacacttcaatgcgcct
ggaagtgatgatttctgtttcctcttgtcaactcgtgctggtggactaggaattaatctt
gcaactgcagatactgtcattatattcgattcggactggaacccacaaaatgatttacag
gcaatgagcagagcgcataggataggacaacaagaagtagtaaatatttatcgattcgtt
accagcagaagtgttgaagaggacatattagagcgtgccaagaagaagatggttttggat
cacctggtaatccagaagttaaatgctgagggcaggcttgaaaagaaagaaacaaagaaa
ggaagctctatgtttgacaagcgtgaactttctgcaattttgaggtttggagctgaggag
ttgttcaaggaagaaaaagatgatgaagataacaagcgactggaaaccatggatattgat
gaaattcttgaaagagctgaaaaggttgaatccaaggagcctgatggagaggaagggaat
gaattactaagtgctttcaaggttgccaatttctgcagtgctgaagatgatgcaaccttt
tggagtcgtttgattcaaccagaagcacaagatcaagttgatgcagccttggcgcctcgt
gctgcaagaaacatcaaaagctatgctgagcatgaacaacctgagaaaagcacaaagagt
aaaaagagtgtggttgattctcgagaaaagacacagaagcgttccagcaaagctgcagat
gctctggtccattctctaccaataatcgagggggctgcagctcaagtaagggaatggtct
tttggtggtttgccgaagaaagatgcttcacatttcgtccgagcggtaaaaagatttgga
aatccacgtcaaattgacctcattgtggctgaggttggtggtgtagttgaagcagctctt
ccagaggcccagattgagctatttgatttattgatcgatggttgtagggaagcagtcagt
ggaggaaacatagatgctaagggaactctcttagatttttttggtgtatctgtaaaggcc
catgaatttttaaatcgtgttgaagagcttcagcttctagcaaagcgcattggacgatat
aaagatcctgtttctcaattccgtctggtaacacaacataaaagtccacaatggtctaaa
agctgtggttggaattcagttgatgatgcgagattgctgcttgggatatattatcatgga
tatggcaattgggaaaagataagattagatcctagtcttggtctaacaaagaaaattgct
ccaataactcttggggaacgggaaacatttttacctcgtgctcctaacttagacaatcgc
gctagtgctcttctgcagaaggagtttgcaagcattaatggtaagtccaaagttaaaggt
tctcgcaaggttgtcaatgaaggggaaaatgtatcaaaattatctggcagtcgagtaaga
gatgtgaacatgaaagctggtttgtcaaaactgaattctagagaaaaagatcgtttccag
aagcttaaagtagaacctcaggttaaagaggaaggtgaaatatcagattctgagcaggaa
agatatcaaaagctaaaggaggagaagtggatggaatggtgtgcagatgtcatggaagag
gaggagcaaacattaaagcgccttcaaaggttgcagactaccagtatagatcttcccaaa
gagaaggttcttttgagaattagaaggtacctccaacttattggaagaaagattgacaat
attgtacagcaacatgaagtatcatataagcaatcccgaatgacaatgagattatggaat
tacgtctccaccttttccaatttgactggagagaggttacatgaaatctattcaaaactc
aaagaggagcaaaatgatgctggagttggaccttcgtacattaacagttatggaaccctc
aacagtaaccagttccctactttgaataatgatctacaaagaaggcaaagaccttaccag
cattcatcccaaccctcagaagcatttcaccggaatcaatccacaggaaaatcagaagct
tggaaacgcaggaaaagatctgaaatggataaccaacttctaatccacagtcattgtcag
ccagatatgatgagcaatggcgttcgtctaaatgagcagacaaattctgcagggattttg
ggtaagggtccagtagaaatgaggaggtatccaaatgatagacctaatagagcacatcct
ggccgttttcctccaggacaaggtcacatgtcatag
DBGET
integrated database retrieval system
