Musa acuminata (dessert banana): 135620340
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Entry
135620340 CDS
T03447
Name
(RefSeq) transportin-1-like isoform X1
KO
K18752
transportin-1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135620340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135620340
03009 Ribosome biogenesis [BR:
mus03009
]
135620340
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135620340
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
135620340
Pre-60S particles
135620340
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IPO5
IBN_N
TPR_DNAAF5
HEAT_2
TPR_IMB1
TOR1L1_N
HEAT_EF3_N
CLASP_N
PDS5
HEAT_MROH2B_C
INTS7_N
HEAT_MROH2B_1st
Ltn1_1st
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
135620340
NCBI-ProteinID:
XP_064979311
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Position
BXJ2-8:complement(54114476..54152481)
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AA seq
899 aa
AA seq
DB search
MAAEATALWQPRDEGLREICGLLEQHISPNSDQSRIWQQLQHYNQLPDFNNYLVFILAHA
EGKSLEVRQAAGLLLKNNLRATFSSLSSSYRQYIKSELLPCLGASDRTIRSTVGTIISVL
VQLDRVAGWPELLQVLARCLASNDFNHMEGAMDAIYKICEDVPEELDVDVPGLSERPINI
FMPRLLQFFQSPHAILRKLSLGSINQFIVVMPAALFMSMDQYLQGLFHLAKDPSAEVRKL
VCSAFVQLIEVRPSFLEPHLRNVIEYLLQANKDPDDEVSLEACEFWSAYCDGTLPPDSLR
EYLPRLIPVLMLNMAYADDDETLFDAEEDESFPDRDQDLKPRFHSSRFHGSDNMEDVSSQ
ACGFHDEDTVNTWNLRKCSAAGLDILSNVFGEEILPTLMPLIQQKLSATSDSNWKEREAA
VLAIGAIAEGCINGLYPHLPEIIAFLIPLLDDKFPLIRSITCWTLSRFSKFIVQSIGHKD
GYEQFDKVLTGLLRRILDTNKRVQEAACSAFATLEEEAADELAPRLEIILHHLLCAYGKY
QRRNLRILYDAIGTLADAVGSELNQPKYLDILMPPLITKWQQLSNSDKDLFPLLECFTSI
SQALGPGFSQFAEPVYQRCIGLIQIQLLAKVDHVTAGVQYDKEFIVCSLDLLSGLAEGLG
GGIESLVAKSNLRDLLLQCCMDQIADIRQSAFALLGDLARVCPAHLHPRLADFLSVAAEQ
LSAAAVKEAVSVANNACWAIGELAVQVHQEIAPVVLAVISCLVPILQNAEGLNKSLLENS
AITLGRLAWVCPELMAPHVEHFIQSWCTTLCIIRDDYEKEDAFRGLCAIVRVNPSGVVSS
LAYLCKAVASWHEIRSQDLHNEICQVLNGYKQMLGDGAWKQCMSTLDPQAVQRLSRFGV
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaggcgacggcgctgtggcagccgcgagacgaggggctccgcgagatctgc
ggccttctggagcagcacatctcccccaattccgatcaatcccggatttggcagcagctc
cagcactacaaccagctccccgatttcaacaactacctcgtcttcatactcgcccacgcc
gagggtaaatcactggaagtacgacaagctgctggtttgctgttgaaaaacaatctcagg
gcaactttcagttccttgtcttcttcatatcggcaatatataaagtcagaattgttgcct
tgtttaggggcatcagataggacgattcgatctacagttggtactattatcagtgttcta
gttcagttagacagagttgctggctggccagagttattacaggttcttgctcgatgctta
gccagtaatgattttaatcatatggaaggtgctatggatgctatatacaagatttgcgag
gatgtccccgaagagcttgatgtggatgttccaggattatctgaacgccccatcaatatt
tttatgccaagattgctgcagttcttccagtctccacatgccatattgagaaagctatcg
ttgggctctatcaatcaatttattgtagtcatgcctgcagccttgtttatgtccatggat
cagtaccttcagggtttatttcatcttgctaaggacccttctgcagaagtgcgaaaactg
gtctgttctgcctttgtccaactaatagaagttcgaccatcattcctggagccccatttg
agaaatgtaatcgagtatctcttgcaagccaataaggaccctgatgatgaagtttctctc
gaagcttgtgaattttggtctgcgtattgtgatggtactttgcctccagattccttaaga
gagtatttgccacgcttgattccagtattaatgttgaatatggcctatgctgatgatgat
gagacactttttgatgccgaggaagatgagtcgtttccagatagagatcaggatctgaag
cctcgttttcattcatcacgcttccatggatctgataatatggaagatgtatcttctcaa
gcttgtggttttcatgacgaggatacagtcaacacttggaatttgaggaaatgtagcgca
gctggactagatatcctttcaaatgtttttggagaagaaattcttccaactttgatgcct
ttgattcagcaaaagttatcagctacaagtgactctaattggaaggagagggaagctgct
gttttggctattggggccattgcagagggatgcattaatggactttatccccatcttcct
gagattattgcatttctcattccacttctggatgataaatttccacttatacggagcatc
acttgttggacactttctcgttttagcaagttcatagttcagagtattggtcacaaagat
ggttatgaacaatttgacaaagtactaacaggactcctcagaaggatattggacaccaac
aaacgtgtgcaagaggctgcatgctctgcttttgcgacacttgaagaggaggcagcagat
gaattggccccacgtttggaaatcattttgcatcatctgttatgtgcctatggaaaatat
cagagacgaaacctacgaattctttatgatgccattggtactctagcagatgcagtgggt
tcagagctcaatcagccaaaataccttgacatattgatgcctccattgatcaccaagtgg
caacaactatcaaactctgacaaagatctattcccattgcttgaatgttttacatccatt
tcacaggctctaggaccaggattttctcagtttgctgaacctgtatatcaaaggtgcatt
ggtcttatccagatccaactattggcaaaggttgaccatgtcacagctggtgtccaatat
gataaagagttcattgtctgctcgctagaccttttatcagggcttgctgaaggtttgggt
ggtgggatagagagcctggttgcaaagtccaacttgagagaccttcttttacaatgttgc
atggatcagatagctgatattcggcaaagtgcctttgcacttctgggtgatcttgcaaga
gtttgtccagcccacctgcatcctcgtctagcagatttcctaagtgttgcagccgaacaa
ctgagtgctgctgcggttaaagaagctgtgtcagtggcaaataatgcttgttgggccatt
ggagaattggctgttcaggttcatcaagaaattgctccagttgtgttagcagtaatatca
tgtttggtccctattctccaaaacgcagagggtttgaacaagtcattgctggaaaacagt
gctatcactcttgggaggcttgcctgggtttgtccggaactcatggcaccacatgtggaa
cacttcatacagtcatggtgtaccactttatgcatcatacgagatgactatgaaaaggag
gatgcatttcgtgggctttgtgcaattgtaagagtgaatccttctggcgtggtgagttcg
ctagcttacttgtgtaaagctgttgctagttggcatgaaatccgtagccaggatctgcac
aatgagatttgccaagttttgaatggttataaacagatgcttggagatggagcatggaaa
cagtgcatgtccacactagatccccaagcggtgcagagattgtcaaggtttggagtataa
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