Musa acuminata (dessert banana): 135620409
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Entry
135620409 CDS
T03447
Name
(RefSeq) RING-H2 finger protein ATL39-like
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135620409
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135620409
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
135620409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
Prok-RING_4
zf-C3HC4_3
zf-RING_16
Baculo_RING
PHD
EHMT1-2_CRR
zf-RING_6
Zn_ribbon_IFT122_C
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
135620409
NCBI-ProteinID:
XP_064979405
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All DBs
Position
BXJ2-8:complement(44490745..44491371)
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AA seq
208 aa
AA seq
DB search
MADQTICCALNNLEIVGLSFTAFLVFLGVFLYVRYLLLRHRPPADPPHERPKAGLDPSAI
AALRSFSYRRASTAEGRRGEHTCTVECAVCLSMVEEGETVRLLSACQHLFHAECIDVWLL
SNSTCPVCRADARPERMAEKANSEERREAMTLEVHGSAASSGKTTAETSGAKEEKLGSSS
SLLQGVRSGRRPQLQLQGNGMPDLESNL
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaactatctgttgcgctttgaacaacctggagatcgtcggcctctccttc
accgccttcctcgtcttccttggagtctttctctacgttcgctacctactcctacggcat
cgaccacctgcagaccctccccacgagcgacccaaggccgggctcgatccctccgccatc
gctgctctccggtccttctcctaccggcgtgcttccaccgccgaaggccgtcgtggcgag
cacacgtgcacggtggagtgcgcggtgtgcctgagcatggtggaggaaggggagacagtg
aggctgctgtcggcttgtcagcacttgtttcatgccgagtgcatcgacgtgtggttactc
tccaactccacttgcccggtctgcagggccgatgccaggccagaaaggatggcggagaag
gcgaactcggaggagaggagggaagcgatgacgctcgaagtgcatggaagtgctgcctca
tcagggaagacgacagcagagacgtcgggtgccaaggaggagaagttgggatcatcgtcg
tcgttgttgcaaggggtgcggtctgggagaaggccgcaactgcaactgcagggaaatgga
atgccagacttggagagtaatttgtga
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