Musa acuminata (dessert banana): 135622273
Help
Entry
135622273 CDS
T03447
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135622273
09123 Folding, sorting and degradation
03018 RNA degradation
135622273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135622273
03041 Spliceosome [BR:
mus03041
]
135622273
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135622273
mRNA cycle factors
Stress granule specific factors
135622273
Spliceosome [BR:
mus03041
]
Complex C
Other components
Complex C specific factors
135622273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_10
RRM_occluded
RRM_Nup35
RRM_7
RRM_YTH1
BRAP2
Motif
Other DBs
NCBI-GeneID:
135622273
NCBI-ProteinID:
XP_064980045
LinkDB
All DBs
Position
BXJ2-9:694761..704303
Genome browser
AA seq
651 aa
AA seq
DB search
MAQVQVQPQPPNGMANNGGAAGVNQFPSSSLYVGDLDVNVTDSQLYDLFSQIGQVVSVRV
CRDIGTRRSLGYAYVNYNSPVDAARALDALNFTPLNNKPIRIMYSNRDPSTRRSGAANIF
IKNLDKTIDNKALYDTFSVFGNILSCKVATDPSCQSKGYGFVQFDQEEAAQNAINKLNGM
LINDKPVYVGPFLRKQERENSADKAKFNNVFVKNLSESTTKEDLERIFGKYGKITSAVVM
REEDGKSKCFGFVNFENTDAAAQAVQELNGQKFDEKEWYVGKAQKKSERERELKGRFDQS
IKEAADKYQGLNLYLKNLDDDIGDDSLKELFSEYGTITSCKIMRDPSGASKGSGFVAFST
PEEAARALADMNGKMINGKPLYVALAQSKEDRRARLQAHFSQMRPVAMTPAIGPRVPMYP
PATPGLGQQIFYGQPPHALIPPQPGFGFPQQHVPGMRPVGAPMPNFYLPLVQQGQQTRPG
GRRASAGPVQQTHQPMPLIQQQMLPRRVFRYPPGRNIPEVPMPGAPGGMLSPYDMGSLPI
REAAISQPIPTGTLATALANATPEQQRTMLGESLYPLVDQLEHDHSAKVTGMLLEMDQTE
VLHLLESPEALKAKVAEAMEVLRNAAQQHQHVNAPADQLAALSLNDGLQVE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggttcaagtgcagccgcagccaccgaatgggatggccaacaatggtggcgct
gccggggtaaaccagttcccgtcctcatcgctctacgtcggtgacctcgacgtgaacgtg
acggactcgcagctgtatgatctgttcagccagattgggcaagtggtgtctgtgcgcgtg
tgccgcgacatcggcacccgccgctcgctgggctatgcctacgtcaattacaacagcccg
gtcgacgctgcaagggcactggatgcgctgaatttcacacctctcaacaataagcctatt
cgtataatgtattcaaaccgggaccctagcactcgtagaagtggggctgctaatatattt
attaagaatctggacaaaacaatagacaacaaagcactgtatgataccttctctgtattc
ggaaacatactttcttgcaaggttgctactgatccttcttgccagtcaaaaggctatggt
tttgttcagtttgatcaagaggaggcggcacaaaatgcaattaacaaattaaatggtatg
cttatcaatgataagccagtttatgttggacctttccttcgtaaacaagaaagggaaaat
tcagcagacaaggcaaaatttaataatgtctttgtcaaaaacctatcggaatctacaaca
aaggaagatttagagagaatatttggcaagtatgggaaaattacaagtgctgttgttatg
agggaggaggatggaaaatcaaagtgctttggatttgtgaattttgaaaatacggatgct
gctgctcaggcagttcaggaactcaatgggcagaaatttgatgagaaggagtggtatgtt
ggaaaagcacagaagaaatctgaaagggagcgagaactgaaaggacggttcgatcaaagt
attaaggaagcagcagataaatatcaaggactcaacttatatttgaaaaatttagatgat
gacatcggagatgattcactgaaagaattgttttctgaatatggtactattacatcttgc
aagattatgcgggatcccagtggtgcaagtaaaggttctggatttgttgctttctcgact
cctgaggaagcagctcgagctcttgcagatatgaatgggaagatgattaatggaaaacca
ctctatgttgcacttgcacaatcgaaagaagataggagagctagattgcaggcacatttt
tcacagatgcggccagttgcaatgacacctgccattggtcctagggtgcctatgtaccct
cctgctactcctggtttgggacaacaaatcttttatggtcaacctccgcatgctcttatt
cctccacagccgggatttggcttcccacaacagcatgttccgggaatgaggcctgtgggt
gctcctatgccaaatttctatttgccattagtccaacaaggtcagcagacacgccctggg
gggagacgtgccagcgctggacctgtgcaacaaacacatcagccgatgcctttaattcag
cagcagatgcttccacgtcgtgtctttcgctatcctcctgggcgcaacatacctgaggtt
cctatgcctggtgcacctggaggaatgctctcaccttatgatatgggtagtttgcctata
cgagaggctgccatttcacaacctattcccaccggtacgctggctacagcccttgctaat
gcaacccctgagcagcaaagaacgatgcttggtgaaagcctgtacccactggtggaccaa
ctggaacatgatcattcagctaaagtgactggaatgcttctggagatggaccagacagaa
gtcctgcatttgttggagtctccggaagcattgaaagcaaaagtggcagaagctatggaa
gtcctgaggaatgctgcacagcagcaccagcatgtgaatgctccagctgatcagttggca
gcattatccctgaatgatggtcttcaagttgaataa
DBGET
integrated database retrieval system
