Musa acuminata (dessert banana): 135622620
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Entry
135622620 CDS
T03447
Name
(RefSeq) YTH domain-containing protein ECT2-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135622620
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135622620
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Gene cluster
GFIT
Motif
Pfam:
YTH
RE_AspBHI_N
Motif
Other DBs
NCBI-GeneID:
135622620
NCBI-ProteinID:
XP_064980696
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Position
BXJ2-9:complement(3947301..3953567)
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AA seq
599 aa
AA seq
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MVGEESCVNMILHAIEDALKKLKIDLPAKVNCINTSGPKGGSQYDSTSCISSGDAGSSTK
ESGVDQEPLVGEQGMYYYGYYYPGSTGLMGEWDDQYYIQGSDSLQVQHPAVQAENGSFVY
YFPGYQAGYTPYSPVLPGAIYGVDGQFLSQGSYYPSSVSPQTLVSPGVLPQPVAYGPELV
PAYPWDPSFFFTDEIQGSISVDPTNPHYKPNLASHAHTRALSKTMPTSKSVLGTKGSSLA
SDVSHPITVQNQAHKPVKKGAAAVLSKGYVPINKFNVYASQGKGELLYSKSAINLKENGR
SWVDDEKLKVKNKLNSHGDFDLLNEQNRGPRTNGSRSSSQSGVDPLEALGAEKNDSGCIS
SDIVNKDEYNRPDFQTKYEHALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDNAFQVA
QEKMAEKNSKCPVFLFFSVNASGQFCGVAEMTGRVDFSKDMDFWQQDKWNGFFPVKWHII
KDVPNPQFRHIILENNDNKPVTNSRDTQEVKFSQGTEMLSIFKSYSFKTSILDDFGFYEN
RQKVMQEKRNRPNTPSLVNSLPKNDEPIEVPKTDDSKSKTPNLVLIEVEDHQTGIPTRK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggtgggggaggaaagttgcgtgaatatgattctgcatgcaattgaggatgcactgaag
aaactgaagatagatctgccggcaaaggtcaactgtatcaatacgtctggtccaaaaggt
ggaagccaatatgattcgacatcctgcatctcctcaggggatgcaggaagcagcaccaaa
gaaagtggggtggatcaagagcctttggtcggtgaacagggcatgtattactatggctac
tattatccaggatctactggtttgatgggggaatgggatgatcaatactacattcaagga
agtgacagcttgcaagttcagcatcctgctgttcaagcagaaaatggctcgtttgtatac
tacttcccaggctatcaagctgggtatactccttacagtccagtcttacctggagctata
tatggtgttgacggacaatttttgagccaagggtcatattatccgagttcagtatcccct
caaacacttgtttctccaggagttttaccacagccagttgcttatgggcctgagttggta
cctgcatacccatgggacccgtcttttttcttcacagatgagattcaagggagcatttct
gtggacccaacaaatccacattacaaaccaaatcttgcatcccatgctcatacccgtgct
ctttccaaaaccatgccgacctcaaaatcagtcttgggaacaaaagggtcctcgctagca
tctgatgtgtcacatcctataacagttcaaaatcaagcacacaagcctgtgaagaaggga
gctgctgctgttctgtccaaaggttatgttccgataaacaaattcaatgtatatgctagc
caagggaaaggtgaactactttattcgaaaagtgccattaacttgaaagaaaatggacga
agctgggttgatgatgagaagctaaaagtgaaaaataagctaaatagccatggtgatttt
gatttgctgaatgaacagaatcgaggtcctagaaccaatggcagcagaagtagctctcag
tctggtgttgacccgttggaagcacttggtgccgagaagaatgatagtggctgcatatcg
agtgatattgttaacaaagatgaatataatcgtcctgatttccagacaaaatatgagcat
gctttgttctttgtaataaaatcatatagcgaggatgatattcacaagagtattaagtat
aatgtctgggcaagcactccaaatgggaacaaaaggcttgacaatgcttttcaagttgca
caagagaagatggcagaaaaaaatagcaagtgtcctgttttcctcttcttttctgttaat
gcaagtggtcagttttgtggtgttgctgaaatgactggccgagttgatttcagtaaggat
atggatttttggcaacaggacaagtggaatgggtttttccccgtgaagtggcacataatt
aaagatgttccaaatccacaatttcgacacataatcttggagaacaatgacaataagcct
gttacgaacagcagggatacacaagaggtgaaattttctcaaggtactgagatgttaagc
atttttaagagctattccttcaaaacatccatattggacgactttggcttttatgagaat
cggcagaaagtcatgcaagaaaagaggaacaggccaaacactccaagtttggttaattca
ctgcccaaaaacgacgaaccgatcgaagtcccaaagacagatgattcaaagtccaaaact
cccaatcttgtgttaatcgaggtggaggatcaccagactgggatccctacaaggaagtga
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