Musa acuminata (dessert banana): 135622654
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Entry
135622654 CDS
T03447
Name
(RefSeq) protein VACUOLELESS1-like isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135622654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135622654
Membrane trafficking [BR:
mus04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135622654
Hops complex
135622654
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
TPR_30
WD40_WDHD1_1st
DUF2968
Motif
Other DBs
NCBI-GeneID:
135622654
NCBI-ProteinID:
XP_064980743
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Position
BXJ2-9:complement(4253519..4264379)
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AA seq
862 aa
AA seq
DB search
MTSVSVAGEWQLLYNRFYRKLTIYTMQWGRIDLSRHRIAAAPFGGPVAAIRDDSKIVQLY
AESARRKLLIFNAAGRALASAIWDRPGGRLVGMAWTDDQVLVCVVQDGTVYRYNVHAELC
APQFSMGKECFEQGVVDCVFWGNGMVCITEGFLIFCVPDFKNPVPCRLSDPGIDEYPLCV
AVIDPQYTMSGNVEVLLGVGDHVLLVEEDGVQQLGVGVGPFQKMAVSQNGKYLATFTHDG
RLLVILTDFSKIIFEYTCEEGTSYNLNLENNMHVLFWRASALPPEQISWCGLDSVLLYWD
ERELLMVGPHGHPVSYLYDEPIRLIPECDGVRLLSNSSMEFLQRVPDSTVSIFQVGSTLP
AALLYDALEHFDRCSSKADENLRLIRSSLAEAVETCIDAAGHEFDVSRQRTLLRAASYGR
AFCSQFPRDHFQEMCKILRVLNAVRNHEIGIPLSIQQYKLLTAPVLIGRLINANHHLVAL
RISEYLNLNPEVVIMHWACAKITASPAIQDSALLEILLDKLKLCKGISYAAIAAHADNSG
RRKLAAMIVDHEPHSSKQVPLLLSIEEEDSALVKAIESGDTDLVYLVLFHIWQKKPALDF
FGTINARPLARDLFISYSRYYKHEFLKDFFLSTGRLQDVAFLLLKESWKLEKNPMASKGS
PLHGPRIRLIEQTQKLFSETKEHNFESKAAEEHAKLLRLQHDLEVSTKQAIFVDSSISDT
IRTCIVLGNHREAMRVRTEFKVSEKRWYWLKAFALATVRDWDALEKFSKEKRPPGGYKPF
VEACIDADEKAEAIKYIPKLTEPRERSEAYARIGMAKEAADAASQAKDSELFGRLKLTLA
QNAAASSIFDTLRDRLSFQGVY
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgtctccgttgccggggagtggcagctcctctacaaccgcttctaccgcaag
ctaaccatctacacgatgcagtggggccgcatcgacctctcccgccaccgtatcgccgct
gcaccctttggcggccccgtcgcggccatccgcgacgattccaagattgtccagctctac
gccgagtccgcccgccgcaagctcctcatcttcaacgccgccggtcgcgccctcgcctcc
gccatctgggaccgcccaggcggccgccttgtcggcatggcctggaccgatgatcaggtc
ctcgtctgcgttgtccaggacggcaccgtctaccgctataacgtccacgccgagctctgc
gccccccagttctccatggggaaggaatgtttcgagcagggcgtcgtggattgcgtcttt
tgggggaacggcatggtgtgcatcaccgaggggttcctgatcttctgcgtccccgacttc
aagaatccggtgccgtgcaggctctctgatccagggatcgatgagtatccgctgtgcgtg
gcggtgatcgatccgcaatacacgatgtccgggaacgtggaggtgctgctcggggtgggg
gatcacgtgctgctggtggaggaggacggggtgcagcagctgggggtcggagttgggcct
ttccagaaaatggctgtctctcagaatgggaagtatctcgcaacattcacacatgatggc
cggcttctggtcattttgacggatttctccaaaatcatctttgaatacacctgcgaggag
gggacttcctacaatctgaacttagagaacaacatgcatgttttgttttggagggcgtct
gccttacctccagaacagatatcttggtgcgggttggacagtgtgctactctattgggat
gaaagagagcttcttatggtgggccctcatggacatccagtgagctatttgtatgatgaa
ccgataagactcattcctgagtgtgatggagtgagacttctttcaaattcaagcatggag
ttcctacaacgagttcctgactctactgtttctatctttcaagttggtagcacattgcca
gcagctttgctatatgatgctttggagcactttgatagatgcagttctaaggctgatgaa
aacttacgattgatccgatcctctctggctgaggcagttgagacttgtatagatgctgct
gggcatgaatttgatgtttcacgccaacggacactgctgagagctgctagctatggtcgg
gccttttgcagtcagtttccacgagaccattttcaagaaatgtgcaaaatactacgagta
ctaaatgctgttcgcaaccatgagattggtatcccccttagcattcaacaatacaagttg
cttactgcaccagtattgattgggcggttgatcaatgccaaccaccatcttgtggctttg
cgaatttctgagtaccttaacttaaatccggaggtggttataatgcactgggcatgtgca
aagataaccgcttcaccagctattcaagactctgctcttctggaaatcttgcttgacaag
ctaaaattatgcaaaggcatatcttatgctgcgattgctgctcatgcagacaacagtggg
cgccgaaagttagctgcaatgattgttgatcatgagccacattcttccaagcaggttcct
ttactactaagcatagaagaggaggattctgccctggtaaaggcaattgaaagtggtgat
acagaccttgtctatcttgttctgtttcatatctggcagaagaagccggctttggatttt
tttggaacgataaatgcaagacctttagctcgtgatttatttatatcatattcaaggtat
tataagcatgagttcctgaaggatttttttctttccacaggtcgactccaagatgttgct
tttcttttgttaaaggaatcatggaagttagaaaagaatccaatggcaagcaaaggatct
cccctccacggtccacggataaggcttattgagcaaactcaaaaacttttttctgaaaca
aaggaacataactttgaatcaaaagctgctgaagaacatgcaaagttgttaagactgcaa
cacgacttagaagtctccacaaaacaggcaatatttgttgattctagcatcagtgatact
atacgaacatgcattgtgctgggaaaccatcgagaggcaatgcgagtgaggacagaattc
aaggtttctgagaagcggtggtactggctgaaagcatttgcgcttgccacagttagagac
tgggatgcacttgaaaaattttcaaaggagaagagaccacctggcggctataaacctttt
gtggaagcatgtattgatgctgatgagaaagcagaagccatcaagtacattccaaaactt
acagagcctcgggaaagatcagaggcatatgcacggattggcatggctaaggaagctgct
gatgctgcttctcaggctaaagatagtgaactgtttggccggttaaagctgactctggct
caaaatgctgctgcatcatccattttcgacaccttgagggatcgattatcatttcaagga
gtatattaa
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