Musa acuminata (dessert banana): 135622686
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Entry
135622686 CDS
T03447
Name
(RefSeq) protein transport protein SEC24 C-like
KO
K14007
protein transport protein SEC24
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135622686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135622686
Membrane trafficking [BR:
mus04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
135622686
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
135622686
NCBI-ProteinID:
XP_064980798
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All DBs
Position
BXJ2-9:4515652..4537226
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AA seq
1124 aa
AA seq
DB search
MSSSPPFVSGQPRPRPGFAPSANPNAAVATHNPQIGRSPPPTSAPRAASPSPFSASSLPG
PPPPFASRPPPQGAAALSQGLISSNGPPVAGIASQRFPPPSPVQQTPPVAAPASIRAPPP
SAAPSQAPGVQSFPGSPPAVAPASLPLMGSPASQPFSRPPPTHTPFAGPPASQPPFAGPR
TSQPPSAGQPTSQPPFPGLTTFQRPFAVPPSSQPPFGGPPTSQPPFAGPPTSQPPFAGPP
NSQPPFAGLPYTGPPTSQPFGASPTVQPFTGAPYAGRPSSPSYMGPPSSQPFSGPPTAAT
PFGAPAWSSQPRQVAPSMPGAVQAPPTMFGMPPSTPGQSMPPIPPALGHSSLAGPQASTP
SKVDPNQIPRPMPSSSVILFETRQGNQANAPPPATSNFIVKDNGNCSPRLMRCTMNQIPC
TGDLLSTSSMPLALMVQPLALPHPSEEPIQIVDFGESGPIRCSRCKGYINPYMRFIDHGR
RFVCNLCGFTNDTPRDYYCNLGPDGRRRDADERPELCRGTVEFVATREYMVRDPMPAVFF
FLIDVSMNAVQTGATAAACSAISQSLADLPDGPQTMVGIATFDCTIHFYNLRRASQQPLM
LIVPDVHDVYTPLQTDIIVQLTECRQGLEQLLENIPSMFDNNKVAESAFGAAIKAGFLAL
KPTGGKLLVFQSVLPSVGIGSLSAREAEGRTNVSAGDKEAHKFLQPADKTLKTMAIEFAE
YQVCVDIFITTQTFVDIASISVVPTTTGGQVYYYYPFSALSDPGKLYNDLRWNISRPQGF
EAVMRVRCSQGLQVQEYSGNFCKRIPTDIDLPAIDSDKTIMVTFKHDDKFQENSECSFQC
ALLYTTVYGQRRIRVMNISLPCTTMLSSLFRSADLDTQFACFLKQAASMLPVSPLSQVHE
QITNLCINILHAYRKFCATVSSAGQLILPEALKLLPLYTLALAKSIGLRNDGRLDDRSYW
ISHVASISISLAIPLVYPRMLSIHDLTTKEDDGSLLALNIPLSSEHINDDGIYLLENGED
GLIYIGNMVNPDTLQQIFGVSSVDGLPSQLVLEQFDNELSKKLNDVVNEIRQQRCSYLRL
RLCKKGDPSGMHFLSYMVEDKSPGGLSYVEFLVHVHRQIQTKMS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtctccgcctttcgtctcgggacaaccacggccgcgacccggcttcgcccca
tcggccaatcccaatgccgccgtcgccacccataacccccagatcggccgctccccaccc
cccaccagtgccccccgcgccgcgtcgccgtcgcccttctccgcctcctccctccccggc
ccccctccccctttcgcgtctcgcccgccgccgcagggcgcggctgccttgtctcagggc
ctgatctccagcaacgggcctcccgttgcgggcatcgcttcgcagcggttccctccgccg
tctcccgtgcagcagacgccgccggtggccgcaccggcgtctatcagggcgcctccgccg
tcggctgccccttcccaggctcccggcgtccagtcgtttcccgggagcccgcctgctgtt
gctcctgcatcgttgccgttaatgggatcgccggcctcgcagccgtttagtagaccaccg
ccaacgcatacaccgttcgctggaccgccagcctcgcagccacccttcgctggaccgcgg
acgtcgcagccgccctcggcaggacagcctacctcacagccgcccttcccgggactgacg
acctttcagcggcctttcgccgtaccgccatcctctcagccacccttcggcggaccacca
acctcacagccacccttcgccgggcctccaacctcacagccacccttcgccggaccgcca
aactctcagccacccttcgctggactgccttacaccgggccgccaacctcacagccattt
ggtgcgtcaccgaccgtgcagccgttcactggggcaccgtacgcaggacgaccatcctca
ccatcatatatgggcccaccatcttctcaaccattttcagggcccccaactgcggccact
cctttcggggctccggcttggtcgtcacagccacggcaggtggccccatccatgcctggt
gctgtgcaagcgcctcctacaatgtttggcatgccaccaagcacgccaggccaatctatg
cctcccattccacctgctttgggtcattcgtctcttgcaggtcctcaggcctcaacacca
tcaaaggtagatccaaaccaaattccacgaccaatgccaagttcctcagtcatactcttt
gagactcgtcagggaaatcaagcaaatgctcctccgcctgcaactagcaatttcattgtc
aaggataatggtaattgcagccctcgtttaatgaggtgcaccatgaatcagataccatgc
accggagaccttttgtctacatctagcatgcctttggcattgatggtgcaaccgttggca
cttccacatccttccgaggagcccatccaaattgtggactttggtgaaagtggacctatt
cggtgttctcgatgcaaaggttacataaatccttatatgagattcatcgatcatggacga
agatttgtttgcaatttatgtggctttaccaatgatactccgcgggattactactgtaat
cttggaccagatggaagacgccgtgatgctgatgaaaggcctgaactttgtagaggaaca
gttgaatttgttgctaccagggaatacatggttcgtgatccaatgcctgccgtctttttc
ttcctcattgatgtttcaatgaatgctgtacaaacgggtgctactgcagcagcttgcagt
gcaatcagtcagtctcttgcagatcttcctgatggtccgcagacaatggttgggattgca
acttttgattgcactattcatttctacaatctaagacgtgcctcacagcagcctttaatg
ctcattgttcctgatgttcatgacgtttatacaccccttcaaacagacataattgttcaa
cttactgagtgccgccaaggtttggagcagttgctagagaacatcccaagcatgttcgat
aacaataaagttgctgagtctgcatttggtgcggctatcaaggctgggttcctggcactg
aaacccacaggtggaaaacttcttgtgtttcagtcagttttgccatcagttggtattggg
tctctttctgccagggaggccgagggaagaacaaatgtttctgctggtgacaaggaagct
cataagtttctccaaccagcagacaagacattgaaaacaatggccatagagtttgctgaa
taccaggtttgtgtggatatattcatcactacccagacttttgtggacattgcatccatt
tctgttgttccaacaactacaggggggcaggtatattattattatccattttctgctctt
tctgatcctggtaaactctacaacgatcttagatggaacatcagtagaccccaaggtttt
gaagcagtgatgcgtgttagatgtagccagggtcttcaagttcaagagtattctggaaac
ttttgtaagcgtattcccactgatattgatcttcctgcgattgacagcgacaaaaccatc
atggtcacatttaaacatgatgataagttccaggagaattcagaatgttcctttcagtgt
gcacttctttacactactgtgtatgggcaaagaagaattcgagttatgaatatctccctt
ccttgcactaccatgctcagtagtctgttccgttcagcagatttggatactcagtttgct
tgttttctcaagcaagctgcaagtatgctccctgtgagccctctttcccaagtacatgag
caaatcacaaacctctgcatcaacatcctacatgcctaccgaaaattttgtgccacagta
tcatcagcaggacagctaattcttcctgaagctctcaagctgttgcctctatatactcta
gcattggctaaaagcattgggttgcgaaatgatgggcggttggatgaccgttcctattgg
atcagccatgtcgcatcaatttctatatcattggctattcctttagtatatcctaggatg
ttatctattcatgaccttactacaaaggaggatgatggatcccttttagctttaaatatt
cctctttctagtgagcacataaatgatgatggaatttatcttttggaaaatggtgaagat
gggttaatttatattggaaacatggtcaacccagataccctacaacagatatttggagtt
tcttctgtggatggacttccatctcagcttgttttagagcagttcgacaatgaattgtca
aagaaactaaatgatgtagtgaatgagattagacagcagagatgttcatacctacgtttg
cggctatgcaaaaagggtgatccttcaggcatgcattttctatcttatatggttgaagac
aaaagtcccggaggcctctcctatgttgagttccttgtacatgtccaccgacaaatccaa
acaaaaatgtcttga
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