KEGG   Musa acuminata (dessert banana): 135622971
Entry
135622971         CDS       T03447                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135622971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mus03019]
    135622971
   03041 Spliceosome [BR:mus03041]
    135622971
Messenger RNA biogenesis [BR:mus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     135622971
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     135622971
Spliceosome [BR:mus03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    135622971
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 RRM_RdRP1_2 RRM_3 LysR_substrate
Other DBs
NCBI-GeneID: 135622971
NCBI-ProteinID: XP_064981439
LinkDB
Position
BXJ2-9:8375132..8380564
AA seq 335 aa
MEDSKKRKLEEEGGSGGAFAMEFSKQLRFLLDPLRKDQLVDLLVKLGNQYPSVAEEIKGL
ASEDPVHRKLFVRGLSWETTSETLCAVFSVHGEIEEGAVIVDKATGKSRGYGFITYKHME
STQKALQEPSKLIDGRLAVCNLACEGLSSTSVTSDLALRKIYIGGLSPDISSENLLSFFS
RHGEIEEGSVAYDKETNKSRGFGFVTFRTVEAAKKAIDDPNKTLGGRNITVKLADSPKSK
IMQSQVPAAMVPITIPVPVGYAQTGKVQIGSSATVGYASYPPALAAYPTAYPNAQIQYPT
APQVSYPQTAKRESVGLPAVASTGITGFPYYVTKP
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggaagactcgaagaagcgaaagctggaggaggaaggcggcagtggaggcgccttcgct
atggaattctccaagcagctgcgcttccttctcgaccctctcagaaaggatcagctcgtc
gatctcctcgtcaaattaggtaaccagtatccttcagttgcagaagaaattaaaggtctt
gccagtgaagatcctgttcatcgcaagctttttgttcgtggcttgtcttgggagactact
tcagaaactctgtgtgctgttttcagtgttcacggagaaattgaggagggagccgttatt
gttgacaaggcaactgggaaatcccgtggttatggcttcattacctacaagcatatggaa
tccactcaaaaggcattgcaagaacccagcaagttgattgatggccgtttggctgtctgc
aaccttgcgtgtgaaggcctaagcagcacttctgtaaccagtgatttagcacttaggaag
atatatataggaggcctttctccggatatatccagtgagaacttgcttagtttctttagc
aggcatggagagatcgaagaaggttcagttgcctatgataaagagactaacaaatcaaga
gggtttggttttgtcacattcaggacagttgaggcagcaaagaaggccatagatgaccca
aacaagacacttgggggaaggaacattactgtgaagctcgcagactcacccaagagcaaa
atcatgcaatcacaagttccagctgcaatggtcccaataactataccagttccagtggga
tatgcacagactggaaaggtgcagatcggtagctcagcgactgttggctatgcttcttac
ccaccagcactggcagcatatcccactgcttatccaaatgctcaaattcagtacccaacc
gcaccgcaagtttcatacccacagactgcaaaaagagaatcggttggattgcctgcagta
gcatctactggaattactgggttcccatattatgttactaaaccatga

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