KEGG   Musa acuminata (dessert banana): 135623216
Entry
135623216         CDS       T03447                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03030  DNA replication
mus03410  Base excision repair
mus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    135623216
   03410 Base excision repair
    135623216
   03420 Nucleotide excision repair
    135623216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mus03032]
    135623216
   03400 DNA repair and recombination proteins [BR:mus03400]
    135623216
Enzymes [BR:mus01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     135623216
DNA replication proteins [BR:mus03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    135623216
DNA repair and recombination proteins [BR:mus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      135623216
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf_DPOE_2 zf-DPOE DNA_pol_B_exo2 RNase_H_2 zf-DNA_Pol
Other DBs
NCBI-GeneID: 135623216
NCBI-ProteinID: XP_064982007
LinkDB
Position
BXJ2-9:complement(13546581..13581896)
AA seq 2212 aa
MNSDSRRRERLTYGRNPSKQKHRLNAEEVLERKLGFDLFTEGDKRLGWLLTFSPSSWEDQ
ETNKIYSCVDLYFVSQDGLTFKVKHKFPPYFYAATKDKMELEVEAYLRRRYERQITDVEI
VDKEDLDLKNHLSGLNRSYLKLSFDTVQQLIHVKNDLMHVVERNQSKLDAAEAFESIYIG
GRKERPQDLMDCIIDLREYDVPYHVRFAIDNDVRCGLWYDISVFSAGILLEKRSDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDLIMMISYMIDGQGYLIINRECVGEDIEDLEYTPKPE
FEGCFKVRNVKDEGELLKAWFAHMQEAKPGIYVTYNGDFFDWPFLEKRASHHGIKMSEEI
GFQCDSNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR
YAMEQPQMMASYSVSDAVATYFLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLM
VQAYKANVICPNKHQSDPEKFYNNRPLESETYIGGHVECLESGVFRSDLPIKFQLDPSAY
EQLIGNLDRDLQFAITVEGKMSIESIANYKDVKNAIMEKLIFLRDHPTCEECPLIYHLDV
AAMYPNIILTNRLQPPSIVTDVVCTACDFNRPGKNCLRKLEWVWRGETYMAKKSDYYYIR
KQIQSELVEFGDGKTMPFLDLPKSEQQLRLKERLKKYCQKAYKRVLDKPVTELREAGICM
RENPFYVDTVRSFRDRRYEYKGLNKVWKGKLADAKTSRNQMNIQEAQDMVILYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCAL
PGSFPENFTFKTSDGKKFTISYPCVMLNVDVARNNTNDQYQTLKDPVTRTYTTHSECSIE
FEVDGPYKAMILPASKAEGILIKKRYAVFNYDGTLAELKGFEIKRRGELKLIKVFQAEVF
DKFLHGSTLEECYAAVASVANRWLDLLDNQGIDIADSELLGYISESSTMSKSLVDYGEQK
SCAVTTAKRLAHFLGDAMVKDKGLHCQYIVAREPQGTPVSERAVPVAIFETDAEIAKYYL
RKWCKITSDVGIRSIVDWSYYTLRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLHKKVC
EKEDRFRQRKLVDIFNTAKRDQVAQDETIVGDIEEILVKDGARVLPPRPVVHIFEFNREI
NSRKPSSPVSGMPVDLQEQDLTLFGSNQSLVSSSNNGISSENVDKTIDYQAWLETKKRKW
KDSREERKRRRLGSTNISDEPVGTTKFPDSSFKYKHSQRFGVSGFFKKHESSLVRSHWQI
LQLVPRTQPGHFYAWVIADGTMHKVPINVPRVFYLNSKAPITEEFPGRRVKKILPHSRPN
FNLIEVVISEEQFRAESKKLAAHLADPEVEGIYETKVPLEFHAIIQIGCVCKVDKAAKLR
NAQDGWNLDELHMKTTAECSYLEQGVTYFYLYHSFSEGRAIYVIYFPTSWTISVVVVNPF
QNKELSSAILEKQFREACHALSIEPPTNGSATFKVEYVRSIDVGSKILQRTLVAHRHQHL
QPAIGIIECPGFQVLKSRIRILEDFPCVTMSFNACDSNYQALGWQVTAGKISMQRCAASS
QWFNERILLSRYAHVPLGNFELDWLLFTADVFFSRALRDKQQVLWISDDGIPDLGGIYEG
DTCFADEVNQPAASYPGAYRKVAVELKIHHLAVNALLKSSLVEETDGGSLFCHESDSHPP
AHDNETDYDEASSCAPAFQVLKQLIQRCISDAVASGNAFADGILQHLYRWLCSPMSKLHD
PALHRVLNMFMKKVFALLLVEFKKLGATIIFANFSKIIIDTGKIELSAARAYCDCLLRTL
QTRELFEWIELEPLHFWHSLLFMDQLNYGGIQAKWPMGLPVEDMEDNSQMNVVSSWNIAE
YLPKVTKDHFVLIVSEFLYIPWKYLKEQVLIRTTNMMDDSTSTQSITVTAAETIEACVNE
YIKEQISNYFTEKLLNIVCDILRRFKGENKGIKDLHATHVLPCSYGSQGNKGDAALEFIK
HVCAVLALDQNVKHDVLRMRKNLLKRIHVKEFSPEAQFRDPCQSFTLPNIICSYCNDCRD
LDFCHDSVLLEDNWHCAVPHCGQPYNREQMENALLQIVRQRERLYHLQDLVCDRCRQVKA
AHLVEQCACGGSFRCHEDLLAFLGKMQVFLSIAACKKFQLLHDCTSWILQVR
NT seq 6639 nt   +upstreamnt  +downstreamnt
atgaattccgacagccggcggcgggaaaggttgacctatggaagaaacccgtcgaagcag
aaacaccggctcaatgccgaggaggtgcttgagcgcaagctagggttcgatctcttcacc
gagggcgacaagaggcttggatggctgcttaccttctctccttcatcatgggaggatcaa
gaaaccaacaagatctacagttgcgtggatctttactttgtttctcaggatggattgacc
ttcaaagtgaaacacaaatttccaccttatttttatgctgccaccaaagataagatggag
ttggaagttgaagcatatcttaggcgtagatatgaaagacaaataactgatgtggagatt
gtggacaaagaggacctggatttaaaaaatcatctttctggtttgaacaggtcatattta
aagctcagctttgatactgtccagcaactaatacacgtcaagaatgaccttatgcatgtt
gttgaaaggaaccaatcaaaattagatgctgcagaggcatttgaatctatatatattggt
ggaagaaaggaaaggccacaagatctaatggattgcattattgatcttcgtgaatatgat
gttccctatcatgttcgttttgctatcgataatgatgttagatgtggtctgtggtatgat
atatctgtctttagtgctggtattttgcttgagaaaaggtctgatcttcttcaacgggca
gaagttcatgtttgtgcattcgatattgagacaacaaagctccctctgaaatttccagat
gctgaatatgatctcataatgatgatttcatacatgatcgatggacaagggtacttgata
atcaaccgggagtgtgttggtgaggatattgaagatttggagtatactccaaaaccagaa
tttgaaggttgctttaaagtaagaaacgtgaaagatgagggagagcttttaaaagcatgg
tttgcccacatgcaagaggctaagccaggtatatatgtcacttacaatggagatttcttc
gactggccattcctagagaaaagagcttctcatcatggtattaaaatgagtgaggaaatt
ggtttccagtgcgacagtaaccaaggggagtgtcgtgccaaattttcttgtcatcttgat
tgttttgcttgggtgaaacgtgatagttaccttcctcaaggaagccaaggtcttaaggct
gttacaaaggctaaattgggttatgatccactggaggtgaatccagaagacatggttcgt
tatgccatggaacaaccacagatgatggcatcatattctgtgtcagatgccgtggcaaca
tattttctatatatgacatatgttcatccgttcattttctctcttgcaactataattcct
atgccaccagatgaggtcctccgaaaaggaagtggaacactttgtgaaatgcttcttatg
gtgcaggcatacaaggctaatgttatttgtcctaacaagcaccaatctgatcctgaaaaa
ttctacaacaaccgccctctagaaagtgaaacatatattggagggcatgttgaatgcctt
gaaagtggtgtttttaggtcagatcttcctattaagttccagcttgatccatctgcatat
gagcaattaattggaaatctggatcgtgaccttcaatttgcaattacagtggaaggaaaa
atgagcattgaatcaattgcaaattacaaagatgtgaagaatgctataatggaaaagctt
atcttcttgcgggatcatccgacatgtgaggaatgcccacttatttatcatcttgatgtt
gctgcaatgtatccaaacatcattttaacaaacagacttcagcctccatcaatagttaca
gatgtagtctgcactgcatgtgactttaatcgtccaggaaaaaattgcctacgtaaacta
gaatgggtttggcgaggagagacctacatggccaagaagagtgattactattacataagg
aaacaaattcagtcagaacttgttgaatttggtgatggtaaaacaatgccatttcttgat
ctccccaaatcagagcaacaattgaggctgaaagaacgcttgaagaagtactgtcagaag
gcatataaaagggttctggacaagcctgtgacagagcttagagaagcagggatatgcatg
cgtgaaaatcccttttatgttgacacagtacgaagtttccgggacagacggtatgaatac
aaaggacttaataaggtatggaagggaaaattggcagatgcaaaaactagcagaaatcaa
atgaacattcaggaagcacaggatatggttatcctctatgattccttacaactcgctcac
aaatgtatactcaattccttttatggatatgtcatgcgcaagggtgcaagatggtactca
atggaaatggcaggagttgtcacttatactggtgcaaaaattatacaaaatgctcgttta
cttgttgaaaagattgggaggccactggaattggatacagatggcatttggtgtgcgctt
ccaggatcttttccagagaactttacatttaaaacaagtgatggaaagaaattcacaatt
tcttatccgtgtgttatgcttaacgttgatgttgccagaaacaacactaatgatcaatac
cagacacttaaagatcctgtcaccagaacttatacaacccacagtgagtgttccattgaa
tttgaagtggacgggccatacaaggcaatgatccttccagcttcaaaggcagaaggaatt
ttaatcaagaagagatatgcagtattcaattatgatggcaccctagcagaactcaaaggt
tttgagatcaaacgcagaggtgagctgaagctcataaaagtattccaggctgaggttttt
gacaaatttcttcatggatcaaccttggaagaatgctatgcagctgttgcatctgttgca
aaccgctggctagatcttttagataaccaaggcattgatattgccgacagtgagcttctt
ggttatatttcagagtcgagcacaatgagtaaatcattggttgattatggggaacagaaa
tcatgtgctgtaactactgcaaaaaggcttgctcattttctgggagatgcaatggttaaa
gacaaaggactccattgccaatatatagtcgcccgagaaccacagggaactccagtaagt
gagcgtgcagtccctgttgcaatatttgaaacagatgcagagattgcaaagtactattta
cgcaagtggtgtaaaataacttctgatgtgggcattcggtctattgttgattggtcttat
tacacgctacgacttagttcagctattcaaaaaattatcaccatccctgctgcaatgcaa
aaggtttctaaccctgtaccaagagtggtccatccggattggttgcacaagaaggtttgc
gagaaagaggatcgttttcgccagcgtaaacttgttgacatctttaatacagcaaaaaga
gatcaggtggctcaagatgagacaattgttggggatattgaagaaattttggtcaaagat
ggtgctagagtacttccacctcgacctgtagttcatatttttgaattcaatagagaaatc
aattcaagaaaaccatcttctccagtatctgggatgcctgttgacctccaggagcaagat
ctcaccctatttggatcaaatcaatcgctagtttcatcgagtaataatggtatttccagt
gaaaatgtggataagaccattgattatcaagcttggctcgaaacgaagaagagaaaatgg
aaggactctcgtgaagagaggaagagacgcagattgggtagcacaaatatatcagatgaa
cctgttggcacaactaagtttcctgactcaagtttcaagtacaagcatagccagagattt
ggtgtcagtggattcttcaagaaacatgaatcaagtcttgttcggtctcactggcagata
ttacagcttgtcccaagaacacaacctgggcacttttatgcctgggttattgctgatggc
accatgcataaggtcccaataaatgttccaagagtgttttatctcaattctaaagctcct
attacagaagagtttcctggaaggcgtgttaaaaagattcttcctcatagcagacctaac
ttcaatctcattgaggttgttattagtgaagaacaattcagggccgaaagcaagaaactt
gctgctcacctagcagatccagaagttgaggggatatatgagacaaaggtgccattagaa
tttcatgctattatccagattggttgtgtttgcaaagtagacaaagctgctaaattgcga
aatgctcaagatggctggaacctggatgagttgcatatgaagactacggcagaatgctct
tatctagaacaaggagttacctacttttatctgtaccacagcttctcggagggaagggca
atatacgttatatacttccccacatcttggacaatatctgttgttgttgtaaaccctttt
cagaacaaagaactatcatcagcaattctggagaaacaatttcgtgaagcttgccatgca
ttatctattgaacctccaacgaatggtagtgctacctttaaggttgagtacgtccgatca
attgatgttggaagcaaaattttgcagagaacattagttgcacacaggcatcaacatctt
caacctgctattggtatcatagaatgtccagggtttcaagttctcaagtcaaggataaga
attctggaagacttcccttgtgtcactatgtcttttaatgcttgtgatagcaattatcag
gctcttggatggcaagttacagctggtaaaattagcatgcaaagatgtgctgcatcatcc
cagtggtttaatgaaaggattttgctatcaagatatgcacatgtgccattagggaatttt
gaacttgattggcttctatttactgctgatgtcttcttctctagggcattgcgtgataag
caacaggtactatggatatctgatgatggaattccagatttggggggcatttatgaggga
gatacatgctttgctgatgaagtcaaccaaccagctgccagttatcctggagcatataga
aaagtggcagttgaactgaagattcaccacctagctgttaatgctcttctcaagagcagt
ctagtggaagaaacggatgggggatccctattttgtcacgaatctgactcacatccccct
gctcatgataacgaaactgattatgatgaagctagctcgtgtgcgcctgcatttcaagta
ctaaagcaactaattcagagatgcatatcagatgctgtggcttctggtaatgcctttgct
gatggaatattgcagcatctttaccggtggctttgcagcccaatgtcaaaacttcatgac
cctgccctccatcgggtcctgaacatgtttatgaaaaaggtgtttgcattgctgctggtt
gagtttaaaaaactaggagccaccatcatctttgcaaacttctctaagatcattatagac
acgggtaagattgaactatcagctgctagagcatattgtgattgtttgctgagaacactg
caaacaagggaactttttgagtggattgagcttgaacctctgcatttttggcattcatta
ctgtttatggaccagttaaattatggagggattcaagccaaatggcctatggggttgccg
gtagaggatatggaggataattctcaaatgaacgtggtatcaagctggaatatagcagaa
tacctaccaaaggtcactaaggatcactttgtcttgatagtgtcagaattcttgtatatc
ccatggaagtacttgaaagaacaagttttgatccgaactactaatatgatggatgatagt
actagtactcaatcaatcacagtcacagctgccgaaacaattgaagcttgtgtcaatgaa
tacatcaaagaacagatcagcaattattttactgagaagcttcttaacattgtgtgtgat
atactccgccgtttcaagggagaaaacaaaggaattaaggacctacatgcaactcatgtt
ctcccctgttcttatggatcccaaggaaataagggagatgcagcattagagttcatcaag
catgtgtgtgctgttcttgctcttgatcagaatgttaaacatgatgttctgcggatgagg
aagaatttattaaaacggatccatgtcaaagagttttctccagaagcacagtttcgtgat
ccatgtcagtcttttacacttccgaatattatttgcagttactgcaatgattgccgggat
ttagacttctgtcatgattcagtacttttggaggataattggcactgtgcggtgccacat
tgtggacagccatacaatcgtgagcagatggagaatgctctccttcaaatagttaggcag
agagaaaggctttaccacttgcaggatcttgtttgtgacaggtgcagacaagttaaagct
gctcacttagtggagcagtgtgcatgtggtggctcattccggtgccatgaagacttgttg
gcattccttggcaaaatgcaagtgtttctcagcatagcagcatgtaagaagttccagcta
ctccatgactgcacctcgtggatcttacaagtcagatag

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