Musa acuminata (dessert banana): 135623532
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Entry
135623532 CDS
T03447
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135623532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135623532
03110 Chaperones and folding catalysts [BR:
mus03110
]
135623532
03029 Mitochondrial biogenesis [BR:
mus03029
]
135623532
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mus04147
]
135623532
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
135623532
Messenger RNA biogenesis [BR:
mus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
135623532
Chaperones and folding catalysts [BR:
mus03110
]
Heat shock proteins
HSP60 / Chaperonin
135623532
Mitochondrial biogenesis [BR:
mus03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
135623532
Exosome [BR:
mus04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135623532
Exosomal proteins of other body fluids (saliva and urine)
135623532
Exosomal proteins of breast cancer cells
135623532
Exosomal proteins of colorectal cancer cells
135623532
Exosomal proteins of bladder cancer cells
135623532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
135623532
NCBI-ProteinID:
XP_064982676
LinkDB
All DBs
Position
BXJ2-9:43917519..43924646
Genome browser
AA seq
612 aa
AA seq
DB search
MASASYTLSTLGAIASPSNFRTDKKLLASKQKLSQFSSFASISSSSISSRRQSLGSLRRG
NCKINAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDG
VTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMIAEGVKVVAAGANP
VQITRGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNFEIGNMIAEAMSKVGRKGV
VTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMTAEYENCKLLLVDKKITNARDLI
NVLEDAIRGGYPVVIISEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAI
LTGATVIRDEVGLSLDKAGKEVLGTAAKVVLTKDSSTIVGDGTTQEEVNKRVAQIKNLIE
AAEQEYEKEKLNERVAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVG
GGCTLLRLASKVDAIKETLDNDEQKVGADIVKRALSYPLKLIAKNAGVNGSVVTEKVLSN
ENFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVDIKEPETLT
AGNPMDNSGYGY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcttcctacacgttgtctactcttggtgctattgcttctcctagcaacttc
agaacagataagaagctcttagcttccaaacaaaagttatcccagttttcttcgtttgct
tctatatcatccagttcgatcagcagcaggagacagagcttgggttcactaagaagaggc
aactgcaagattaatgcaatggctaaggaattatacttcaacaaagatggatcagctatc
aaaaagctacaaactggtgtcaacaagcttgctgatcttgttggggttacacttggtccc
aagggcaggaatgttgtcttggaaagcaagtatggatcacctaagatcgtaaatgatggg
gttacagtagcgaaagaggttgagctagaggatcctgttgagaacattggtgccaagcta
gtaagacaagcggctgccaagaccaatgacttggctggggatgggacaactacttctgtt
gttcttgctcaagggatgattgcagaaggtgttaaggtggttgcagccggtgccaaccca
gttcagattacccgtggcatcgagaaaacagccaaagcactagtttctgaacttaagaag
atgtctaaagaggttgaggacagtgaacttgcagatgttgcagctgttagtgctggtaac
aactttgaaatagggaacatgatagctgaggcaatgagcaaggttgggaggaagggtgtg
gttacccttgaagaagggaaaagtgctgaaaacaacctctatgttgttgaggggatgcag
tttgaccggggttatatttccccttactttgtgacagacagtgaaaagatgactgctgaa
tatgagaattgcaagttgcttcttgttgacaagaaaattacaaatgcaagagatcttatc
aatgtgttggaagatgccataagagggggatacccagtcgtgataatttcagaagatatt
gaacaggaagcccttgcaacccttgttgtgaacaaactaagagggtcattgaagattgct
gcacttaaagctcctggatttggggaacgcaaaagtcagtaccttgacgacattgcgata
ttgacaggagccactgtaatcagagatgaagttgggctttccttggataaagcgggaaaa
gaggtcttgggtactgctgcaaaggttgtactcacgaaagattcgagtaccatagttggt
gacgggactacacaggaggaagtaaacaaaagagttgcacagatcaagaatctaattgag
gctgcagagcaagaatatgagaaggaaaagctaaacgagagagtagcaaagctctctggt
ggtgttgcagtcattcaggttggagcacaaacagaaacagagttaaaagagaagaaattg
agagttgaagatgccctgaatgctaccaaggctgctgttgaggaaggtattgttgttggt
ggtggttgtacccttctgaggcttgcttcgaaagtcgatgccatcaaggagactcttgat
aatgatgagcaaaaggttggagcagacatagtaaagagggccttgagctacccacttaag
ttgattgctaaaaatgccggtgtaaatggaagtgtggtaacagagaaggtgctgagcaat
gaaaacttcaagtttggttacaatgctgccacgggaaaatatgaggatttgatggctgcg
ggtataattgatcctaccaaggtggtgaggtgttgcttggaacatgctgcttcagtagcc
aagactttcctcacatcagacgttgtggttgttgacatcaaagagcccgaaactcttact
gcaggaaatccaatggacaactcaggttatggctactaa
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