Musa acuminata (dessert banana): 135623552
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Entry
135623552 CDS
T03447
Name
(RefSeq) WD repeat-containing protein RUP2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04120
Ubiquitin mediated proteolysis
mus04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135623552
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
135623552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
135623552
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135623552
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135623552
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
135623552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
YNR034W-A-like
Motif
Other DBs
NCBI-GeneID:
135623552
NCBI-ProteinID:
XP_064982733
LinkDB
All DBs
Position
BXJ2-9:44298325..44300130
Genome browser
AA seq
374 aa
AA seq
DB search
MNHSPAVSGPPQEPSEQQQQAAHEERARCEWNFRLSAAVSPAATGAISDAIGTVEFDPTD
RLLAAGGIARKIRIYGLRSLLPEERGPSPTFSDHSTACRLCICTPAKLSSLRWRPDSSGR
IIGSGDYDGVVTEYDVERGFPVFERDEHAGRRVWCVDYSVDGALGASGSDDGTVQLWDSR
CADGGCTAVARADGAVCSVEFDPEGGPWVGVGSADRHAYVFDLRAVSAGPVAALRGHGRT
VTYVRFAPGGRRVVTSGIDGSHRLWDWAEGRQVRAYRGHANSRNFIGMSVWRGAGLIGSG
SESNEVFVYDLRWGEPIWVQGFGNRGEEGQSRDGFVGVASWRQSAAGDGEGALAAGGSDG
VLQVFVGRKMTGSD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaccattccccagcagtctccggtccgccgcaggagccgtcggaacagcaacagcaa
gctgcgcatgaagagagagctcggtgcgaatggaacttccgtctctcggctgctgtctcc
ccggcggccaccggagccatctccgacgccatcggcaccgtcgagttcgaccccaccgac
cgcctcctcgccgcaggcggcatcgctagaaagatcaggatatacggcctccgcagcttg
ctgccggaagagcgcggtccgagccccaccttttccgaccactcgactgcctgtcggctg
tgtatctgcacgccggccaagctcagcagcctgcggtggcggcccgactcgagtggccgc
atcattggttccggcgactacgacggcgtggtcaccgagtacgacgtggagcggggcttc
cccgtgttcgagcgtgacgagcatgccgggcgccgcgtctggtgcgtggactactccgtt
gacggggccctcggtgcttcggggtccgacgacggcaccgtgcagctatgggactcgagg
tgcgccgacggcggatgcacggcggtcgcacgcgccgacggagcggtctgcagcgtggaa
ttcgacccggagggcgggccgtgggtcggggtggggagcgccgaccggcacgcgtacgtg
ttcgatctgcgggcggtctctgcagggccagtggcggcgctcagagggcatgggcggacg
gtgacgtacgtgcggttcgcgccgggagggcggcgggtggtcacgtcggggattgacggc
tcccaccgactgtgggactgggcggaggggaggcaagtccgggcgtaccgcggccacgcc
aactcgcgtaacttcatcggcatgtcggtgtggcgcggcgcggggctcatcgggagcggg
tcggagagcaacgaggtgttcgtgtacgatctccggtggggggagccaatatgggtgcag
ggcttcgggaaccgaggggaggaggggcagagccgcgacgggttcgtcggggtggcgagc
tggaggcaatcggcggcaggggacggcgagggcgcgctcgccgcaggcggatccgatggg
gtgttgcaggtgttcgttgggaggaagatgacgggatctgactga
DBGET
integrated database retrieval system
