Musa acuminata (dessert banana): 135623801
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Entry
135623801 CDS
T03447
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135623801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mus03009
]
135623801
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
Pre-60S particles
RNases
135623801
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEDDh_C
HIP1_clath_bdg
Csd6-like_dimeriz
Motif
Other DBs
NCBI-GeneID:
135623801
NCBI-ProteinID:
XP_064983235
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All DBs
Position
BXJ2-9:complement(48860598..48874069)
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AA seq
494 aa
AA seq
DB search
MGKTISGADREVLAEIVRLTQKQGLKGAEGGWKDFLQCHEKQFGSGLSDPAKRPKELLVA
FLQTFRKEEKKVFDKMIRRNSDHNAMKQLIKDSPGLESPQQRLVRLTMEHPRYTQDHSLP
VYDEDWIDIPLGKVSEAMKLNAMISVDCEMVLCQDGTDAVVKICAVDHNLEVKLEKLVNP
GKVVADYRTHITGISSKDLEGVTCSLVDIQKSLKKLLSHGTILVGHSLHNDLQALKVNHP
RVIDTSYIFKCAGLPTLSPSLNNLCKVVLGFPVRKEGEPHNCMNDAQAAMKLVLAKLEHG
YDDHIVMSCCDIPNSDLAKLLLHKIPIEVPTQELQTLFSREYNVIIESVTRLRGESYSTY
AVFKNFIEADEAFKKIEGHQKKDSSGRPQKLVFMKLSSGKTTSFYVRRMTAEVHFNDANT
SKRPVQEDPGQQQAGDGTIDVKRQKTCLYSCNHVKDIEKLREELHEREEEIFNLQKTLFE
VTRNEHLCNETMST
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagacgatttctggtgccgacagggaggttcttgctgagattgtgaggttaacc
caaaaacaaggactgaaaggtgccgaaggaggatggaaagatttcctacaatgccacgaa
aaacaatttggttctggtttaagtgacccagccaagagacctaaagagctattggttgcc
tttcttcaaacatttaggaaagaagaaaagaaggtatttgataaaatgataagacggaat
agtgatcataatgcaatgaagcagttgataaaagactctccgggcttagaatcgcctcaa
cagaggctggttcgtttgacaatggaacatccacgttatacacaagatcactctttacct
gtctatgatgaggattggatagatattccgttaggtaaagtttctgaagcaatgaaattg
aatgctatgatctctgttgattgtgagatggttctttgccaagatggcactgatgcagtg
gtgaaaatatgtgcagtagatcacaatttggaggtgaaacttgaaaaacttgtgaacccc
gggaaagttgttgctgactatagaactcacattactggaatatcttccaaagatttggaa
ggagttacttgctccttggttgatatacagaaatccttgaagaaactcttatcacatggg
actattttagtgggccatagtttgcataatgatttacaagcactaaaagttaatcatcca
cgagttattgacacatcatacatcttcaagtgtgctggtctacctaccctttcgccttcc
ttaaataacttgtgtaaggtggtgttgggttttccagtccgcaaggaaggagaaccacac
aattgtatgaatgatgcacaagctgctatgaagctagttcttgctaaattagaacatgga
tatgatgatcacattgttatgtcatgctgtgatatacctaattctgatttggcaaagcta
cttcttcacaaaataccaattgaagtacctactcaagaattgcaaacgttattctctagg
gaatacaatgtcattattgagtctgttacaaggcttcgaggtgaaagctattcaacatat
gctgttttcaaaaattttatagaggcagatgaagcattcaaaaaaatagaaggtcatcag
aagaaggattcaagtggtcggccacagaaacttgtcttcatgaaacttagcagtggaaaa
acaaccagcttctacgtccgcaggatgactgctgaagtccattttaatgatgccaacaca
tcaaagaggccagtgcaagaagatccagggcagcaacaagcgggagatggaaccatcgat
gtgaaaaggcagaagacttgtttgtactcatgcaaccatgttaaagatatcgagaagttg
agggaggagttgcatgaaagggaagaggaaatttttaatttgcaaaagactctatttgaa
gttacccggaacgaacatttgtgcaatgaaaccatgtcaacatga
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