Musa acuminata (dessert banana): 135624297
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Entry
135624297 CDS
T03447
Name
(RefSeq) chromatin structure-remodeling complex protein BSH-like isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03082
ATP-dependent chromatin remodeling
mus03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135624297
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135624297
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mus01009
]
135624297
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
135624297
03036 Chromosome and associated proteins [BR:
mus03036
]
135624297
Protein phosphatases and associated proteins [BR:
mus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135624297
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135624297
SWI/SNF complex
135624297
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135624297
PBAF complex
135624297
SWI/SNF complex
135624297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
135624297
NCBI-ProteinID:
XP_064983827
LinkDB
All DBs
Position
BXJ2-10:3988990..4016373
Genome browser
AA seq
276 aa
AA seq
DB search
MRSFHPGASKAPMKFRMPTAENFVPIRLDLDIDGQRFKDAFTWNPNDPDSEVNNFAKRTV
KDLKLPPTFVTQIAQSIQTQLAEFHSYEGQEMHIKEKIVPLKIDLRVNNTVIRDQFLWDI
SNLESDPEEFARTFCKDLDIGDPEVGPAIAVSIREQLYEIATQSISSARETRVGKKGRRG
ADIVANSFVFCSKAGNTVDLGKLFGSKGSVIRKRKEWYLYEPIVDILSNEEVGALDAREE
LNARESWMKKKRASRHAILMAELCLPMVDRRGLLTA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagatccttccatccaggcgcctccaaagcccccatgaaatttagaatgccaacggcg
gagaatttcgtgcccattcgcttggatttggatatcgatggtcagcgcttcaaagatgcc
ttcacttggaatcctaatgatcctgactcggaagtgaacaattttgctaaaaggacagtg
aaggatctcaaactacctccaacatttgttacccagattgctcaatccattcaaacacaa
ttagcagagtttcattcatatgaagggcaagaaatgcatatcaaggagaaaattgtgccg
ctgaagattgaccttcgtgttaataacactgtaataagagatcaattcttgtgggacata
agcaatttggaaagtgatcctgaagaatttgcacgaactttttgcaaggacttggatatt
ggagatcctgaagttggaccagcaattgcagtttccataagagagcagctttatgagatt
gcaactcaatctatttcttcagccagagaaaccagggttgggaagaagggtcgacgagga
gcagatattgttgcaaacagttttgttttttgcagtaaagcaggcaatacagtggactta
ggaaagttatttggcagtaaaggaagtgtcatccggaaaaggaaagaatggtatctgtat
gagcccattgttgatattttgtcaaatgaggaagttggggctcttgatgcaagggaagaa
ctaaatgctcgagaaagctggatgaaaaagaagagagcttccagacacgctattctcatg
gctgaattgtgtctacccatggtcgaccgaaggggactgctgactgcttga
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