Musa acuminata (dessert banana): 135624795
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Entry
135624795 CDS
T03447
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
mus03015
mRNA surveillance pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135624795
09122 Translation
03013 Nucleocytoplasmic transport
135624795
03015 mRNA surveillance pathway
135624795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135624795
03041 Spliceosome [BR:
mus03041
]
135624795
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135624795
TREX complex
135624795
Spliceosome [BR:
mus03041
]
Complex C
Other components
EJC/TREX
135624795
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135624795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
RRM_3
Kdo_hydroxy
Motif
Other DBs
NCBI-GeneID:
135624795
NCBI-ProteinID:
XP_064984814
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All DBs
Position
BXJ2-10:26557881..26561049
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AA seq
239 aa
AA seq
DB search
MSSALDMSLDDIIKNNKQSAPGGRGRGRGSGAGPARRVPNRSANRSAPYSVGKAPDSAWQ
HDMFAAQMGGVPAPAARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINYDR
SGRSKGTAEVVFARRADALAAVKRYNNVLLDGKPMKIEIIGMNISTPAAVPQLSNGTFGN
SNGASKSTGPGRGSAGWPRSGGRGRGRDRGRGRGRGEPVSAAALDAELDKYHAEAMQTN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgcactggatatgtccctcgacgacatcattaagaacaacaaacaatcggcg
cccggggggcgtggacggggccgtggctccggtgccggccccgcccgccgcgtccctaac
agatcggcgaaccgatccgccccttactctgtcgggaaggctccggactcggcgtggcag
catgacatgttcgcggctcagatgggcggtgttcctgctccagcggctagggcgtcttcc
atagagaccggcaccaagctgtatatttcgaacttggaatatggggtttcgaacgaggac
atcaaggagcttttttcagaggtgggtgatctgaagcgctattcaataaattatgataga
agcggaagatctaagggaacggctgaagtggtatttgcaaggcgggccgatgctttagct
gctgtaaagagatacaacaatgtgctgcttgatggaaagccaatgaaaatagaaattatt
ggaatgaatatctcaacaccagctgctgtgcctcagttatctaatggcacttttgggaat
tctaatggtgcttccaaaagcactgggccaggaaggggttctgcaggatggccacgaagt
ggtggccgtggaagggggagggaccgtggacgaggtagaggtcgtggtgaaccagtatct
gctgcagcacttgatgctgagttggacaaataccatgcagaagcaatgcaaaccaactga
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integrated database retrieval system