KEGG   Musa acuminata (dessert banana): 135624795
Entry
135624795         CDS       T03447                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03013  Nucleocytoplasmic transport
mus03015  mRNA surveillance pathway
mus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135624795
  09122 Translation
   03013 Nucleocytoplasmic transport
    135624795
   03015 mRNA surveillance pathway
    135624795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mus03019]
    135624795
   03041 Spliceosome [BR:mus03041]
    135624795
Messenger RNA biogenesis [BR:mus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     135624795
    TREX complex
     135624795
Spliceosome [BR:mus03041]
 Complex C
  Other components
   EJC/TREX
    135624795
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    135624795
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz RRM_3 Kdo_hydroxy
Other DBs
NCBI-GeneID: 135624795
NCBI-ProteinID: XP_064984814
LinkDB
Position
BXJ2-10:26557881..26561049
AA seq 239 aa
MSSALDMSLDDIIKNNKQSAPGGRGRGRGSGAGPARRVPNRSANRSAPYSVGKAPDSAWQ
HDMFAAQMGGVPAPAARASSIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYSINYDR
SGRSKGTAEVVFARRADALAAVKRYNNVLLDGKPMKIEIIGMNISTPAAVPQLSNGTFGN
SNGASKSTGPGRGSAGWPRSGGRGRGRDRGRGRGRGEPVSAAALDAELDKYHAEAMQTN
NT seq 720 nt   +upstreamnt  +downstreamnt
atgtcgagcgcactggatatgtccctcgacgacatcattaagaacaacaaacaatcggcg
cccggggggcgtggacggggccgtggctccggtgccggccccgcccgccgcgtccctaac
agatcggcgaaccgatccgccccttactctgtcgggaaggctccggactcggcgtggcag
catgacatgttcgcggctcagatgggcggtgttcctgctccagcggctagggcgtcttcc
atagagaccggcaccaagctgtatatttcgaacttggaatatggggtttcgaacgaggac
atcaaggagcttttttcagaggtgggtgatctgaagcgctattcaataaattatgataga
agcggaagatctaagggaacggctgaagtggtatttgcaaggcgggccgatgctttagct
gctgtaaagagatacaacaatgtgctgcttgatggaaagccaatgaaaatagaaattatt
ggaatgaatatctcaacaccagctgctgtgcctcagttatctaatggcacttttgggaat
tctaatggtgcttccaaaagcactgggccaggaaggggttctgcaggatggccacgaagt
ggtggccgtggaagggggagggaccgtggacgaggtagaggtcgtggtgaaccagtatct
gctgcagcacttgatgctgagttggacaaataccatgcagaagcaatgcaaaccaactga

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