Musa acuminata (dessert banana): 135624804
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Entry
135624804 CDS
T03447
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
135624804
04121 Ubiquitin system [BR:
mus04121
]
135624804
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135624804
Membrane trafficking [BR:
mus04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
135624804
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135624804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
zf-rbx1
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_Vps41
zf-C3HC4_3
DUF1272
zf-RING-like
zf-Nse
Motif
Other DBs
NCBI-GeneID:
135624804
NCBI-ProteinID:
XP_064984821
LinkDB
All DBs
Position
BXJ2-10:complement(26618397..26624628)
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AA seq
391 aa
AA seq
DB search
MASMETASTYWCHHCCRFVLIWPWDAVICPDCGGGFLDAPGRFPLASETATEPRRRRVPS
AVDNSSAAVGRRRQSSEIRFRRNNRASTGDRSPFNPVIVLRSPPVGGRRDADWTTNSSFE
LYYDDGTRSGLRPLPESMSEFLMGSGLERILDQLSQTEVDGIGGAPGFEYSPASKVAIES
MPTIEIADGHISMESHCAVCKDPFVLGTEVREMPCKHIYHQDCILPWLSLRNSCPLCRHE
MPTDVQEMEDDERTHVAENEEETVGLTIWRLPGGGFAVGRFTGGRRGTERELPMVYTEMD
EGIRTAGTPRRISWSSRGNRSRESGRIVRAFRNFFSFFRRLRSPPTSSLSLTSESRSFST
TSLRHRRYPFFSRSYRGQSTSRVLEDGDDDN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatggagacggcatcgacgtactggtgccaccactgctgtcgcttcgtcctc
atttggccctgggacgcagtcatctgcccagactgtggcggtggcttccttgacgcgcct
ggccgctttcctcttgcctccgagaccgctaccgagcctcgtcgccgccgcgtcccttcc
gccgtcgacaacagctccgcggccgtcggccgtcggcgccagtcctcggaaattaggttc
cgccgtaacaatcgtgcgtccactggcgaccgctctcccttcaaccccgtcattgttctt
cgcagtcctcccgtaggcggacgacgcgatgcggattggaccaccaacagcagcttcgag
ctctactacgatgacggcacccgatccggtctccgccccttgccggaaagcatgtcggag
ttcttgatgggctcgggattggagagaatactcgaccagctctcccagactgaggttgac
ggaatcggcggtgcgcctggtttcgagtactcgccggcttcgaaggtcgccatcgagtct
atgcccactatcgagatcgccgatggccatatctcgatggagtcccattgtgccgtctgc
aaggaccccttcgtgctcggaactgaggtccgtgagatgccctgcaaacacatctaccac
caggattgcatcctgccttggctctcgctaagaaattcctgccctctttgtcgccatgag
atgccgacggatgtgcaagaaatggaggacgacgagcggactcatgtggctgagaacgag
gaggagacggtggggctcaccatatggaggcttccaggtggtgggttcgctgttgggagg
ttcactggtggcaggagaggcacggaaagagagcttcctatggtttacacagagatggat
gaaggaattaggaccgctggcacaccgagaaggatatcgtggtcctcaagaggaaataga
tccagagagagtggaagaattgttcgggcattccgcaatttcttctccttcttcaggcgt
cttcgatctcctcctacatcttcactgagtctgacctccgagtctcgctctttctcaacc
acttctcttagacacaggagatatccattcttcagtaggagctatcggggacagagcaca
agtagggtattggaggatggtgatgatgataactga
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