KEGG   Musa acuminata (dessert banana): 135624993
Entry
135624993         CDS       T03447                                 
Name
(RefSeq) sm-like protein LSM1B isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    135624993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mus03019]
    135624993
Messenger RNA biogenesis [BR:mus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     135624993
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     135624993
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 135624993
NCBI-ProteinID: XP_064985246
LinkDB
Position
BXJ2-10:complement(29252502..29256510)
AA seq 128 aa
MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANVVLEGACERVIVGDL
YSDIPLGLYVIRGENVVLIGELDLEREEIPAHMICVSVAEIRRAQKAERDATDLKGSMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcgtgggcgggaccagaagatatctttctctccacctccctagcgagctaccttgac
aaaaagcttcttgtattattacgtgatgggcgaaagcttctaggtgttcttcgttctttt
gaccaatttgcaaatgtggttcttgaaggtgcttgtgagcgagtgattgtaggtgatctc
tattctgatattcctctaggcctctatgtgatccgtggggagaatgttgtcttaatagga
gaactggacttggagagggaggagattccagcccacatgatttgtgtttcagttgcagag
attagaagagcacaaaaggcagaaagggatgccactgatctgaaagggtccatgagaaag
aggatggagttcctcgatctggattga

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