Musa acuminata (dessert banana): 135624993
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Entry
135624993 CDS
T03447
Name
(RefSeq) sm-like protein LSM1B isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135624993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135624993
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135624993
mRNA degradation factors
5'-3' decay
Lsm complex
135624993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
135624993
NCBI-ProteinID:
XP_064985246
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Position
BXJ2-10:complement(29252502..29256510)
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AA seq
128 aa
AA seq
DB search
MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANVVLEGACERVIVGDL
YSDIPLGLYVIRGENVVLIGELDLEREEIPAHMICVSVAEIRRAQKAERDATDLKGSMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggcgggaccagaagatatctttctctccacctccctagcgagctaccttgac
aaaaagcttcttgtattattacgtgatgggcgaaagcttctaggtgttcttcgttctttt
gaccaatttgcaaatgtggttcttgaaggtgcttgtgagcgagtgattgtaggtgatctc
tattctgatattcctctaggcctctatgtgatccgtggggagaatgttgtcttaatagga
gaactggacttggagagggaggagattccagcccacatgatttgtgtttcagttgcagag
attagaagagcacaaaaggcagaaagggatgccactgatctgaaagggtccatgagaaag
aggatggagttcctcgatctggattga
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