Musa acuminata (dessert banana): 135625013
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Entry
135625013 CDS
T03447
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3-like
KO
K14026
SEL1 protein
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135625013
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Gene cluster
GFIT
Motif
Pfam:
Sel1
Motif
Other DBs
NCBI-GeneID:
135625013
NCBI-ProteinID:
XP_064985273
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Position
BXJ2-10:29540944..29551094
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AA seq
676 aa
AA seq
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MRRRVIPFALLHLLSLALLASSQRRLVILREDYADFFSTPSALGTADDSRGSEDSANWDE
FGDPESSLTAAGDYDPGSWLPMIESASSPLSFVNSSSDPREALYYSGVRHMISAAAASSD
PADMEAAAAEIEAAASAGLPHAQSALGFLHGTGLMRSQSRPKSFLYHHFAAKGGNMQSKM
VLAYTYFRQDMHEEAVKLYAELAEVAIASFRISKEPPVIEPIRIHSGTEENKEALRKSRG
EADENFQIIEYQALKGNSFAMYQIGLLYYYGLRGVRRDNTKALHWLLKAVEKGDPRAMEF
LGEMYTRGAGVERNYTKAFELLTLASKHKLYSAYNGLGYLYAKGYGVEKKNYTKAKEYFE
KAVENKEPGGYYNLGVLYLKGIGVKRDLETACKLFLAAANAGQPKAVYQVARLFQTGIGL
KKNLQIATHLYKTVAERGPWSSLSSCALESYLKGDVGKSLLLYSRMAELGYEVAQSNAAW
ILDKYGEQSICMGESGFCTNTERHLRAHTLWWQASEQGNEHAALLIGDAYYYGRGIARDY
ERAAEAYMHARSQSNAQAIFNIGYMHEHGQGLPLDLHLAKRYYDQALAVDPAAQLPVKLA
LMGLWIRMNYADSSLVKVIDSLPKLFPRLEAWVDEVLMDEGNATILTLFACLLAVLYLRE
RQRRQAEAPQPDNAPN
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgccgcgtgatccctttcgcccttctccacctcctctccctcgctcttctcgca
tcgtcacaacgtcggctggtcatcctcagggaagactacgccgacttcttttccaccccc
tccgccttaggcacggccgatgactcccgcggctctgaagactccgctaactgggacgag
ttcggagacccggagtcatccctcaccgccgctggagattacgacccgggctcatggctt
cccatgatcgagtccgcctcctctcctctctctttcgtcaactcctcctctgacccacgc
gaggctctctactactccggcgtccgccacatgatctccgccgcggccgcctcctccgac
ccagcggacatggaagctgccgctgccgagatcgaggccgcggcctccgctggcctcccc
cacgcccagtccgctcttggcttcctccacggtaccggcctcatgcgctcccagagccgc
cccaagtccttcctctaccaccacttcgccgccaagggcggcaacatgcagtccaagatg
gtcctcgcctacacctatttccgacaggacatgcacgaggaggcagtgaagctctatgcg
gaactcgcggaggtggccatcgcgagctttagaatatcgaaggaaccgcctgtgatcgag
cctatccggatccacagtggtaccgaagagaataaagaggcactgaggaagtcacgaggg
gaggcagatgagaattttcagatcatcgagtaccaggcattgaagggcaattcgtttgcc
atgtaccagatcgggttgctgtactattatgggttgaggggagtgaggagggacaacacc
aaggcgctgcattggttgttgaaggccgtggagaagggggatccgagagcaatggagttc
ttaggggagatgtatacccgaggggctggagtggagaggaattacaccaaggctttcgaa
ttgctaactcttgcatccaagcataagctctactctgcctataatggtttgggatacctc
tatgctaaaggttatggagtagagaaaaaaaactacactaaggcaaaggaatattttgag
aaagctgtggaaaataaggagcctggtggttattataacctaggtgtgttgtatcttaag
ggcattggtgtgaaaagagatttagagacagcctgcaaattatttcttgctgcagctaat
gccggtcagccaaaggctgtctaccaagttgcaagattgttccagacaggcataggcctc
aagaagaatcttcaaatagctacacatttgtacaaaacagtggcagagaggggtccttgg
agctccttatcaagttgcgctctggagtcttatctgaaaggagatgtgggtaagtcactt
ctgttgtattccagaatggcagagctgggatatgaggtggcacaaagtaatgctgcttgg
atccttgataaatatggagaacaaagcatttgcatgggcgaatctggcttttgcacaaac
acagaaaggcatcttcgtgcccacactttgtggtggcaagcatcagagcagggtaatgaa
catgcagctttgttgattggcgatgcttactactatggccggggaattgctagagactat
gaacgagctgcagaggcatacatgcatgctcggtcgcaatcgaatgctcaggccatcttt
aatataggatacatgcatgaacatggtcaaggacttccacttgatcttcatctggctaaa
aggtactatgatcaggcccttgcagttgatcctgcagcacaattaccagttaagctggcg
ctcatgggcttgtggataaggatgaactatgctgacagctccctggttaaggtgattgat
tcacttccaaaactatttccaagattagaggcatgggtggacgaagtactgatggacgaa
ggaaatgcaaccatattaactctgtttgcttgcctcttggctgtactttacctccgggaa
cggcagaggcggcaagctgaggcccctcaacctgataatgcacccaattag
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