Musa acuminata (dessert banana): 135625038
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Entry
135625038 CDS
T03447
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
135625038
Spliceosome [BR:
mus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
135625038
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
135625038
NCBI-ProteinID:
XP_064985344
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Position
BXJ2-10:29929897..29938799
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AA seq
459 aa
AA seq
DB search
MSSSSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELGKPFGKIVNTKSNVGANRNQAFV
EFADLNQAISMISYYASSSEPAQVRGKTVYIQYSNRQEIVNNKVSGEVAGNVLLVTIEGV
EAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTASEARNALDGRSIPRYL
LPEHVTSCYLRISFSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIEGNLQPALGPDGKIKE
PESNVLLAAIENMQYAVTVDVLYTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTAAVAK
EALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTISSTGILSNPQASSVPSASTV
WQTNPQVAGTSVGSIGMQAPVPVGQTAAWDPSKTTFASPAGTFPGQPFVPSAGAPFPTSG
GPPSAPAGYFQASQQRPQYGVQPRPASGAPPFGQPPGYF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcctcggggcagccgcagttccggtacacgcagacgccgtcgaaggtgctc
cacctccggaacctaccgtgggagtgcacggaggaggagctaatcgagctcggcaagccg
tttggtaaaatcgtcaacaccaaaagcaacgtcggggctaatcgcaaccaggcttttgtt
gagttcgcggaccttaatcaggccatctcaatgatttcatattatgcctcctcatctgaa
cctgcacaagttcgtggtaagactgtttatatccaatattcaaacaggcaagaaattgtg
aacaataaggtctctggagaggttgctgggaatgttctgcttgttacaattgagggtgtc
gaagctggtgatgttagcatagatgttattcacttggtcttctctgcctttgggtttgtt
cacaagattgctacttttgaaaaggctgctggctttcaggctttgatccaatacacagat
gcaccaactgcttcagaagctagaaatgcgttggatggaagaagtatccccaggtacttg
cttcctgagcatgttacatcttgctacctacgaatttctttttctgcacatacagattta
aatatcaagttccagtctcatcgcagcagagattacactaatccttacctacctgtaaat
ccatctgcaattgaggggaatttgcagcctgcgcttggtcctgatgggaaaataaaggaa
cctgagagtaacgtgcttcttgcagcaatagaaaacatgcagtatgctgtcacagttgat
gttctttacacagtattctcagcatttggtactgtccagaagattgcaatatttgagaag
aatggtggaactcaggctttgatccagtatccagatgtgactactgcagctgttgctaaa
gaggctctggagggacactgcatttatgatggtggctattgtaagcttcatctgtcatac
tctcgtcatactgatctcaatgtaaaggcttatagcgacaagagcagggattacaccatt
tctagcaccgggatactttccaatccacaagcttcctctgtgccaagtgcttccactgtt
tggcaaactaatcctcaagtagctggaacttctgtcggcagcattggcatgcaagcacca
gttccagtcggacagacagcagcttgggatccaagtaaaacaacctttgcatcaccggct
ggaacattcccaggccagccatttgttccatctgcaggtgccccgttcccgacttccggc
ggtcctcctagtgcaccagctggttattttcaagcttcgcagcagaggcctcagtatggt
gttcagccaagacctgctagtggcgcaccgccctttggacaacctcctgggtatttctag
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