KEGG   Musa acuminata (dessert banana): 135625076
Entry
135625076         CDS       T03447                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03018  RNA degradation
mus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135625076
  09123 Folding, sorting and degradation
   03018 RNA degradation
    135625076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mus03019]
    135625076
   03041 Spliceosome [BR:mus03041]
    135625076
Messenger RNA biogenesis [BR:mus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     135625076
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     135625076
Spliceosome [BR:mus03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    135625076
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 135625076
NCBI-ProteinID: XP_064985448
LinkDB
Position
BXJ2-10:complement(15290650..15296065)
AA seq 99 aa
MSSRKETVLDLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEATEFLRDPDDPLKT
TDQTRHLGLIICRGTAVMLVSPTDGTDEIANPFVQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcaagcaggaaggaaacagttttggatttggcaaagttcatcgacaagggtgtccag
gtcaagctaactgggggaagacaagtgacaggaactttgaaaggttatgatcagctgcta
aacttggtgcttgatgaagcgacagagtttctgagagatcctgatgatccattgaagact
actgatcaaaccaggcatcttggcctaataatatgcagaggaacagcagtaatgctggtg
tcaccgacagatggtacagatgaaattgctaacccctttgtccagccagatggagcctaa

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