Musa acuminata (dessert banana): 135626335
Help
Entry
135626335 CDS
T03447
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135626335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135626335
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135626335
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135626335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
135626335
NCBI-ProteinID:
XP_064987634
LinkDB
All DBs
Position
BXJ2-11:complement(5078557..5079420)
Genome browser
AA seq
287 aa
AA seq
DB search
MSSQRGGGGGGRQHLVVRSVWAWNLEYEFSIIASLVDRFSYVAFDTEFPGFLYRTRRPHR
LLPPSLRYAFLKANVDKMELVQLGLTLFDAFGDLPSIGTGGRVGYAWEFNFREFDVRRDL
HAPDSVDLLRSSGIDFDRLPLYGIDSGQFAAHLYRSGLVAHCRFCRPHSTRWIAFHSCYD
FAYLIKVLGFGRPLPDTLEEFLGLVNLLFGETVDLKHIMRGCKGLSGGLERVASTLGVPR
QAGKSHQAGSDSLVTCQVYLKMKRRFFDDQDAKVACHRGIIYGLQAC
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgcaacgaggaggaggaggaggagggcggcaacatttggtggtgcgctcggtt
tgggcgtggaacttggagtacgagttctccatcattgcttccctcgtggatcgcttctct
tacgtcgccttcgacacggagtttcccggcttcctctacagaactcggaggccacaccgt
cttctcccgcccagcctgcgctacgccttcctcaaggccaacgtcgacaagatggagctc
gtccaactcggcctcaccctcttcgacgccttcggcgacctcccctccatcggcaccggc
ggcagggtcgggtacgcgtgggagttcaacttccgcgaattcgatgtccgacgcgacctc
cacgcgccggactccgtcgacctgctccgctccagtggcatcgacttcgaccggctcccc
ctctacggcattgactccggccagttcgccgcccacctctatcgttccggcctcgtcgct
cattgccgtttctgccgcccgcactccactcgatggatcgcctttcacagctgctacgac
ttcgcctatctcatcaaggtgctggggttcggccggcctctgcccgacaccctggaagag
ttcctcggcctggtgaacttgctcttcggagagactgtggatctcaagcacattatgcgc
ggctgcaagggtctctccggcgggctggagagagtggcgagtaccctcggggtgccacgc
caagctgggaagtcgcatcaagctggatcagatagcttggtgacctgccaagtctatctg
aagatgaagcggaggttcttcgacgaccaagacgccaaggtggcctgccatcgcggcatc
atctacggcctacaagcctgctga
DBGET
integrated database retrieval system
