Musa acuminata (dessert banana): 135626440
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Entry
135626440 CDS
T03447
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
135626440
Spliceosome [BR:
mus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135626440
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
DUF4680
Motif
Other DBs
NCBI-GeneID:
135626440
NCBI-ProteinID:
XP_064987792
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Position
BXJ2-11:complement(25259970..25264827)
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AA seq
490 aa
AA seq
DB search
MARQDNPFSLLGDDDDGGDVAALLLKVEAKISAAAAAAAAGVVVEEKPKSRTGTDGFLSK
PLPPERMERGRGRGGRGRGLGRTGFRSGSTGGADDDAAVKFVSEYLRGFGSDSGGRGRGY
AGGRGGRGRGRGRGFHEGQGFDNADMEIQGKGGDGLDERADALSRYELVENREPRYESRK
FGDEQKSSGWEEKNFDSDNRRFRGAEGRERRGFGGGKHGYRGGVSQRYVEREPVLDGKSD
GWNESQIKEDAPKGKDQTENNALTGDDASGWNLPATTNIPKGAEADNADQKQLVAQEALV
ETNTKEEDNEMTLHEYAKVLQEKRKALVSLKIEERKVVVDKDFESMQLVERKKEDDFIKL
KIEKEKLKKKDNTEKEEKVRKSVSINEFLKPAEGERYIGPSSGRGRGSGGRGRGRGDRGG
YRGGYSGRGGHDAATALHFEDPTQFPLLGAAAKKVGMESVICFLGQMLKPLLSCGTEGQR
HYPSSYLFFG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacaggacaatccgttctccctcctgggtgacgacgacgatggcggcgatgtc
gcagccctccttctgaaagtcgaggccaagatctctgcggcggcggcggcggcggcggcg
ggtgtagtggtggaagagaaaccgaagagcaggaccggcaccgatgggttcctttctaaa
cctcttccccctgagcggatggagaggggtagggggagaggcggtcgtggccgtggactt
gggagaactggatttcgatctggtagcaccggtggtgctgatgatgatgccgccgtaaag
tttgtgagtgagtacttgaggggtttcggaagtgattctggtgggcgtggccggggatat
gctggtggcagaggtggaagggggcgtggaaggggaaggggcttccatgagggccaggga
tttgataatgctgacatggagatccagggcaagggcggagatgggctggatgagagggcc
gacgccctcagcagatacgaacttgtggagaaccgtgagcccagatatgagagtaggaag
tttggcgacgagcagaagagttcaggatgggaggaaaagaattttgacagtgacaaccgt
cgcttcagaggtgctgagggccgtgaaaggagggggtttggtggaggcaaacatggttac
agaggtggtgttagccagaggtatgtggagagggagcctgtcctggatgggaaaagtgat
ggatggaatgagtctcaaattaaagaggatgctcccaaggggaaggatcaaactgagaat
aatgcgctcactggtgatgatgcatctggatggaacctgcctgcaactaccaatatcccg
aagggggcagaggcagacaatgcagatcagaagcaattggttgctcaagaggctcttgtg
gagactaataccaaggaagaggataatgaaatgaccctccatgaatatgcaaaggttctt
caagagaaaagaaaggctttagtttctctgaaaattgaagagagaaaggtggtcgttgac
aaggattttgagagtatgcagctcgttgagagaaagaaagaagatgattttattaaactg
aaaattgagaaggaaaagctgaagaagaaggataatactgaaaaagaagaaaaagttcgt
aagtcggtgagcataaacgaatttctaaaacctgcggagggagagaggtacattgggcca
tcatctggtcgtggacgtggttctggtgggagaggtcgtggtcgtggagatcgtggtgga
tatagaggtgggtattcagggcggggaggccatgatgctgccaccgcactccattttgag
gatcctacccagtttccccttttaggggctgcagccaagaaagtggggatggaatctgtg
atctgttttcttggccaaatgttgaaaccgttgctcagctgtgggaccgagggccaaagg
cattatccgtcttcctatttgttcttcgggtag
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