Musa acuminata (dessert banana): 135626617
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Entry
135626617 CDS
T03447
Name
(RefSeq) nuclear pore complex protein NUP107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135626617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135626617
03036 Chromosome and associated proteins [BR:
mus03036
]
135626617
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135626617
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135626617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
135626617
NCBI-ProteinID:
XP_064988122
LinkDB
All DBs
Position
BXJ2-11:28073420..28100035
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AA seq
1071 aa
AA seq
DB search
MEMDDAPSNFDPQDLSSREQYRRYRKRQSTSNISPLVGHSVSKFSEARLLYEGNNIQRRP
NTALLLEEIKQEVDNFDTDASWKRRASIDSHAVSEVKFGDSLRQGVSHALKIGKHEDEAL
LEAGESTFTLFASLLDSALQGLMPFADLILRFEKACRSVSESIRCGSTGRHRVVEDRIMQ
QKARVLLDEAASWSLLWYLFGKGNEELPGNLLVTPTTSHQEACRFVMMDHTAQLCLRIVL
WLEGLASESLDLAKKVRGSHVGSYFPSSGVWHHTQRYLKKMSGDPAIVQHMDFDASTREV
AQPILDDKKQDELLLEDIWTLLRAGRLEEACELCRSAGQPWRAASLCPFGGFDHFPSVEA
MHKNGKMRTLQAFELESGIGHQWRLWRWASYCASEKIAEQDGGRYEMAVYASQSSNLRRL
LPICTDWESACWAMAKSWLDVQVDSILAQFQQARLEGKQFGEDINGSSMQGLSSTASSEN
WPCHVLDQQPRDLPALLQKLHSSEVVHEAVSRACEEQHRQIEMNLMLGDMAHLLELLWAW
ISPSEDNQNILRPHGDPEMLRFGAHVVLVLRNLLDDDMKDAFKEKLTTVGDLILHMYAMY
LFSKQHEELVGVYASQLARHLCVDLFVEMMELRLNSSMHVKYKLFLLGMEYLPFSSEDDS
KACFEDILERVLLRSRETKPSKPVGKLSDVAEEHRLQSLQKAMVIQWLCFTPPSTIRDVE
VISAKLLMRALMHSNTLFREFALISMWRVPKMPIGAHMLLSFLAEPLKQPNFDEDDASED
LHEFEDWREYYACDATYRNWLKFELENAAIAPAELSSEEKDRAAATALETLDSSLSLLLR
EGNPWLNVAHDRTYDPTEDMYIELHATAMLCLPSGECMLPDATSCTTLTSALYSSVSEDD
VLKRQLRVNVAVSSSDNYRIEVALHCLAVNGDGLGLHEANDGGLLATVIAAGFKGELNRF
QPGVTMEISRLDAWYSSEDGSFRSPANYIVKGLCRRCCLPELILRCMQVSVSLAETRDLK
DHHNELIELVASSEYGILHLFSQHQLQEFLLFEREFSLYGMEVEEESVVDT
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggagatggacgatgctccgagcaatttcgacccccaagatctcagcagcagggagcag
tatcgtcgctacaggaaaaggcaatcgacctcaaatatttcgccactcgtaggacattca
gtgtcaaagttttctgaggcaagattgttatatgaaggaaacaatattcaacgacggcct
aacaccgcacttctccttgaagagatcaaacaggaagtagacaatttcgatactgatgct
tcatggaaaagacgagcatcaattgatagtcatgcagtgtcagaagtgaaatttggtgat
tcattgcgccaaggagtaagccatgcgctaaaaattggcaaacatgaagatgaggcatta
ctagaagctggagagtcaacttttacattatttgcctctctcctagactctgcacttcaa
gggttgatgccctttgctgatctcattttgcgttttgagaaggcatgtcggagtgtctct
gagtcaatcaggtgtggtagtactgggaggcaccgggtggtagaggacagaatcatgcag
caaaaggctcgtgttttgcttgatgaggcagcttcttggtcacttctttggtatctcttt
ggaaaaggaaatgaagagcttcctggaaacctccttgtgacaccaacaacatcacatcag
gaagcctgccgttttgtaatgatggatcatacggcacaactatgccttcgaattgtcctt
tggctagaaggtcttgcctcagaatctcttgatttagcaaagaaggtgagagggtctcat
gttggctcctattttccaagctctggtgtttggcatcatacacagaggtatttaaagaaa
atgagtggtgatccagcgatagttcagcacatggattttgatgcctcaacacgtgaagta
gctcaaccaattttggatgacaaaaagcaagatgaattattgctggaagatatctggact
ttacttagagcagggagattggaagaggcatgcgaattatgtcgttctgcagggcagcct
tggagagctgcaagtctttgcccctttggagggtttgaccatttcccttctgttgaagcc
atgcacaaaaatggtaagatgagaactttgcaagcctttgaattggaaagtggcataggt
caccaatggcgtctttggaggtgggcatcatattgtgcctcggagaaaattgcagaacag
gatggtggaaggtatgagatggctgtctatgcttcacagtctagtaacttgagacgtttg
ctgcctatctgtactgactgggagtcagcttgttgggcaatggcaaaatcctggcttgat
gtccaagttgactctatattagctcagtttcaacaagctagactggaaggcaaacaattt
ggcgaagatataaatgggtcttccatgcaaggattatcttctacagcaagttcagaaaac
tggccatgtcatgtgcttgatcagcaaccacgggatcttccagcacttcttcaaaaactt
cattcaagtgaagttgtacatgaagctgtctccagagcttgtgaagaacagcatcgacaa
attgagatgaatctcatgctgggagatatggcacatcttctagagctactttgggcatgg
atatcaccttcagaagataatcagaatatcctgaggcctcatggtgatcctgaaatgtta
cgctttggagcacatgtagttcttgttcttcggaatttgcttgatgatgacatgaaggat
gctttcaaggagaagcttacgactgttggtgatctcatacttcacatgtatgcaatgtat
ttattttctaagcaacatgaggagttggttggagtatatgcctctcagcttgcccgtcac
ctttgtgttgatctctttgtcgaaatgatggagctcagactaaacagcagtatgcatgtt
aaatacaagctcttccttttgggtatggagtatctacctttctcttcagaagatgactct
aaggcatgttttgaagacatcctagaaagggtgctcttgagatcacgggaaacgaaacct
agcaagcctgttggaaaattgtctgatgttgcggaagagcatcgtttgcaatctcttcag
aaagctatggttattcagtggctctgtttcacaccaccttctactataagggatgttgag
gttatcagtgcaaagcttcttatgagggcattgatgcatagcaacacactattcagggag
tttgctctgatatctatgtggagagttcctaaaatgccaattggagctcatatgttgctc
agtttcttggcggaaccattaaaacagcctaattttgatgaagacgacgccagtgaggat
ctgcatgagtttgaagactggcgtgagtattacgcatgcgatgcaacatatcggaattgg
ctcaagtttgagcttgagaatgcagctattgcacctgctgaactatcttcagaagaaaag
gatagagctgctgccacagctttagaaacactagattcttctctgtcactattgctgaga
gaaggaaacccatggctgaatgttgctcatgatagaacatatgatccaacagaggatatg
tatattgaattgcatgcaactgcaatgctctgtctgccttctggtgagtgcatgctccca
gatgcgacctcttgtactacattgaccagtgcactttactcctccgtcagtgaagatgac
gtgttaaaacgccaattgagggtcaatgttgcggtttcctcaagtgacaactatcgcatt
gaagtagcacttcactgcttggcagtgaatggtgatgggcttggacttcatgaagctaat
gatggaggtcttcttgctactgtcatagctgcaggttttaaaggtgagcttaatcggttt
caacctggagttacaatggaaatatcccggcttgatgcttggtactcatccgaggatggt
tccttcagaagccctgctaattacatagtgaaggggctttgccgaagatgttgcctgcca
gagctcattctccgatgtatgcaggtgtcagtttctcttgctgaaacacgtgatttaaaa
gatcaccataatgaattaattgaattagttgcctcctccgagtatgggattctgcatttg
tttagtcaacaccaattacaggaatttttattgtttgaaagggaattttcactatacgga
atggaggttgaagaagagtctgtcgttgacacctga
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