Musa acuminata (dessert banana): 135627088
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Entry
135627088 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC135627088
KO
K14315
nucleoporin NDC1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135627088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
135627088
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135627088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
135627088
NCBI-ProteinID:
XP_064989123
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All DBs
Position
BXJ2-11:30787029..30791856
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AA seq
543 aa
AA seq
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MSSSSLPDEVVKNRWLGFLIWQSITSAVIHLSSSLLLHRLGRGSSSSAAATLFAFLAFHL
SLLLLSLAIFLLSTPHPDPSASLPDLAAATLRASLKSLVGGFSRPSFTADFAHRARRSLA
SGVFLLVCGVAGFLSVVAVCGNAEVVDGASLVGVGLRGLVFGLVYGLHYVYRRRWILKFP
IIQRPFFYSFKIGLSQSLKRALKLSVQAYVSSVILIFFLPDQLKNKNMIGKFIIQQLRFY
IGILTVSICWELSHHLLQDVHTRRCIFAPPQGSAAAETNPSEILLETLEQSSPRSLIQYL
AYLDLCLVTESNAEPWRRAAFFEETGETYQRTINVCLRPIEQLASGLAEGLEGFSINRSD
LLSKQLNSPVDIQVDSRLHEALNDFQICSWCARALGALTARSHLEDRYGVAQLTGCNKAV
VSTLLSCLLAVEACVGKKTSVQLAHMLGPANIRWATVNTGKRDAVPALTTKKRGAALHAK
AYAMADVLKTSIYQVVSAFQTDMQANAKASVLEKNWIAEGKPIYGTREILIQKLHHFLDY
RAV
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcgtcgcttcccgacgaagtcgtcaagaaccggtggctcgggtttctgatc
tggcagtccatcacgtctgccgtcatccacctctcctcctccctcctcctccaccgcctc
ggccgcggctcctcctcctccgccgccgcgactctctttgctttcctcgccttccacctc
tccctcctcctcctctccctcgccatctttcttctctccactccccatcccgacccctcc
gcctccctccccgaccttgccgccgccaccctacgcgcttctctcaagtccctcgtcggc
ggcttctcccgtccatccttcaccgccgacttcgcccaccgggcccggcgctcgctcgct
tccggtgttttcctgttggtttgtggcgttgcgggattcctctcggtggtggccgtgtgc
gggaatgctgaggtggtggacggggctagcctggttggcgtggggttgagagggttggtt
tttgggctggtttatggtctccattatgtttacaggaggaggtggatcctaaaatttccg
atcattcagcgtccttttttctacagcttcaagattggtctgtctcaatcattgaaaaga
gctcttaagttatcagttcaggcttatgtctcttcggtcatactaattttctttttgcct
gatcaattaaagaacaagaatatgattggaaaattcattattcaacagctcagattttac
attgggatacttactgtttctatctgctgggaactaagccatcatctacttcaggatgta
catactaggaggtgcatttttgcaccaccacagggatcagctgcagcagaaacaaatcct
agtgaaattctgctagagactttggaacaaagcagtccaagatccctcatacagtatctt
gcatatcttgatctgtgtcttgttacagagagcaatgcagaaccttggcgtcgagctgcc
ttttttgaagaaactggtgaaacttaccaaagaactataaatgtatgcttaaggcctatc
gagcagcttgcctctgggcttgctgaaggtcttgaaggtttttccataaatagatctgat
ctcttgtccaagcaattaaattcacctgtagacattcaagtggactccaggcttcatgaa
gctctcaatgattttcagatttgctcgtggtgtgcaagagctctgggagcattgacggca
cggtctcacctagaggataggtatggagttgctcaacttactggctgcaacaaagcagtc
gtttcgacattgttatcttgcctgctggctgtggaggcttgtgtgggtaaaaaaaccagc
gtacagctggcacacatgctgggccctgccaacatcagatgggcgacagtcaacactggg
aaaagagacgctgtgcctgcactgactaccaaaaaaagaggcgccgcactgcatgctaaa
gcttatgccatggctgatgttctcaaaacatccatataccaagtcgtgtctgctttccaa
acggatatgcaggcaaatgcaaaagcttcggtcttggagaagaattggattgccgaggga
aaacctatctatggtacacgtgagatccttatacaaaagttgcatcactttttggattat
cgcgccgtctga
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