Musa acuminata (dessert banana): 135627237
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Entry
135627237 CDS
T03447
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus00040
Pentose and glucuronate interconversions
mus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
135627237
Enzymes [BR:
mus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
135627237
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
135627237
NCBI-ProteinID:
XP_064989324
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Position
BXJ2-11:1715679..1719445
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AA seq
427 aa
AA seq
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MAVRSLRCSSLLVLGLWVLLPGAMGWSGGETVSVSSAAGKEVVVGAVDDPELVASEVHMM
IKNSTARRALGYLSCSTGNPIDDCWRCDPEWHRNRKRLADCGIGFGRNAIGGREGRFYVV
TDSGDDDPVNPRPGTLRYAVIQEEPLWIVFKRSMVITLEQELIMNSFKTIDGRGAEVHIA
NGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHYGWRTIADGDGVSIFGASHIWVD
HNSLSNCADGLIDAIIGSTAITISNNYFTNHNEVILLGHSDSYVRDKAMQVTIAYNHFGE
GLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYLAPTNPFAKEVTKRVD
TDSSVWKSWNWRSDGDLLLNGAYFTTSGGGSSGSYAKASSLGAKSSSMVGSITSDAGALR
CRKGSQC
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacgatctctgaggtgttccagtttgctggtactagggctttgggttctccta
cctggagccatggggtggtctggaggcgaaaccgtctctgtctcgagtgctgctgggaag
gaagtggtggtgggcgcggtggacgatccggaactggtcgcgtctgaggtacacatgatg
atcaaaaacagcaccgctcgccgggccctcgggtacttgtcctgctcgacagggaacccc
atcgacgactgctggcggtgcgaccccgaatggcaccgcaaccgcaagcgcctggcagac
tgcggcatcggcttcggccgcaacgccatcggcggccgagaaggccgcttctacgtcgtg
acggactccggcgacgacgaccccgtgaacccgcgcccgggcaccctccggtacgcggtc
atccaggaggagcccctctggatcgtgttcaaacgcagcatggtcatcaccctcgagcag
gagctcatcatgaacagcttcaagaccatcgacgggcgcggcgccgaagtccacattgcc
aacggcgcctgcatcaccatccagttcgtcaccaacatcatcatccatggactccacatc
cacgactgcaagcccacggggaacgccatggtccgcagctccccttcccactacggctgg
aggacgatagccgacggggacggagtgtccatcttcggagcaagtcatatctgggtcgac
cacaactctctctccaactgcgctgatggccttatcgacgccattataggatccactgcc
atcaccatctccaacaattacttcaccaaccacaatgaggtgattcttttgggccacagt
gattcttacgttagggacaaggccatgcaagtcaccatcgcctacaaccacttcggcgaa
ggtctcattcaaagaatgcctaggtgcagacatggctacttccacgtcgtgaacaatgac
tacacccactgggagatgtacgccattggcggaagcgccgacccgaccatcaacagtcaa
ggaaacagatacctcgctcctaccaacccctttgccaaggaggtaaccaagagagtggat
acggattcgagcgtgtggaagagttggaattggagatcagacggcgaccttctgctgaac
ggcgcctacttcaccacctccggaggtggatcctccggaagttacgcgaaggcctccagc
ctcggagccaagtcctcgtccatggttggctccatcacatctgatgcaggcgccctacgc
tgccgcaagggttcccaatgctga
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