KEGG   Musa acuminata (dessert banana): 135627349
Entry
135627349         CDS       T03447                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03018  RNA degradation
mus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135627349
  09123 Folding, sorting and degradation
   03018 RNA degradation
    135627349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mus03019]
    135627349
   03041 Spliceosome [BR:mus03041]
    135627349
Messenger RNA biogenesis [BR:mus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     135627349
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     135627349
Spliceosome [BR:mus03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    135627349
 Complex C
  U2 snRNP components
    135627349
SSDB
Motif
Pfam: LSM SM-ATX LSM14 DUF150_C
Other DBs
NCBI-GeneID: 135627349
NCBI-ProteinID: XP_064989491
LinkDB
Position
BXJ2-11:23277368..23281106
AA seq 93 aa
MLFFSYFKELVGKEVTVELKNDLAIRGILHSVDQYLNIKLENIRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDIDILHDATRREARGP
NT seq 282 nt   +upstreamnt  +downstreamnt
atgctcttcttctcctacttcaaggagttggtggggaaagaagtgacggttgaactgaag
aacgatctcgccatcagagggatcctccactccgtcgaccagtacctcaacatcaagctc
gagaacatccgggtcgtagaccaggacaaataccctcacatgttgtccgtgaggaattgc
tttatcaggggatcagtggtgcggtatgtccaactaccgcctgatggtgtcgacatcgac
attcttcacgatgccaccaggagagaggctcgtgggccttga

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