Musa acuminata (dessert banana): 135627982
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Entry
135627982 CDS
T03447
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mus03041
]
135627982
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135627982
Spliceosome [BR:
mus03041
]
Complex C
Other components
Complex C specific factors
135627982
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_30
AAA_19
ResIII
AAA_7
Flavi_DEAD
AAA_11
nSTAND3
AAA_23
Il13Ra_Ig
DUF5462
SRP54
AAA_29
T2SSE
Motif
Other DBs
NCBI-GeneID:
135627982
NCBI-ProteinID:
XP_064990538
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All DBs
Position
BXJ2-11:complement(9621364..9657010)
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AA seq
699 aa
AA seq
DB search
MAQFWRPGSERPRATLVDDEEGGVLFVSAPPPSSSSGFGHSSLERQRQRLPVFKYRDAIL
YLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVVACTQPRRLAVQSVASRVAEEM
GVKIGEEVGYTIRFEDQTNPSVTVIKFLTDGVLIREMMDDPLLTKYSVIMVDEAHERSMS
TDMLLGLLKKIQRRRPELRIIISSATIEAKSMSTFFKARKKDLRHAAEDSVPSHLPAVLS
VEGKGYTVEIHYVEEPVPDYLQAAVGTVLSINDKEPAGDILVFLTGQDDIDAAVKLLRED
TQDDRRRTSGLLVLPLYSGLSRVDQDLVFAPTPKGKRKVVISTNIAETSLTLEGVVYVVD
SGFSKQRFYNPISDIESLVVTPISKASARQRAGRAGRIQPGKCFRLYTEEYFLKEMPTEG
IPEMQRSNLVSCVIQLKALGIDNILGFDWLASPPPEAMVRALEVLYSLGILDEDAKLTSP
IGYQVAEIPLDPMISKMILSACNFGCSEEIITIAAVLSVQSIWVSMWGAQKEFDEVKLRF
AAAEGDHVTYLNVYKGFLNSGKSSQWCYKNYLNYQAMKKVVDVREQLSRLLRRLGLALKS
CEKDTQILRKAIIAGFFANSCHLEEYSYNGLYKTVRSSEEVYIHPSSVLFRVNPKWVVYH
SLVSTNKHYMRNVIAIDPSWLIEAAPHFYQVRTPNLAPC
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctggcgaccgggctcggagcgaccccgagcgacgctagttgacgatgaa
gagggcggcgtccttttcgtctccgcgcctcctccctcctcatcctccgggttcggacac
tcgagcttggagaggcagcggcagaggctgccggtgttcaagtaccgggatgccatcctt
tacctggtggagaatcacgctactacgattatcgttggtgagaccggcagcgggaagacc
acccagataccccagtatcttaaagaggcaggttgggctgaaggtggtcgtgttgtagct
tgcacacaacctaggcgattggctgttcagtcagtcgcatcacgggtagctgaggagatg
ggtgtcaaaattggagaagaagttggttatactatacgatttgaagatcagacaaatccg
agtgtaactgtgataaaatttctcactgatggggtgctgatcagagaaatgatggatgat
cctcttttaaccaagtatagtgtcataatggtggacgaggctcatgaaagatccatgtca
acggacatgttattaggcctcttgaagaagatccaacgccggaggcctgagttgcgtata
atcatatcatctgcaacaattgaggcaaagtccatgtcaacttttttcaaagctagaaag
aaggatttacgacatgcagctgaagactctgtgccaagtcatctgcctgccgtcctttct
gttgaaggtaaaggttatactgtggaaattcattatgttgaagagccagtgcctgattat
ttgcaagctgctgttggtactgttctatcaatcaatgataaggagccagctggtgatatt
ctggtgttccttacgggtcaagatgatattgatgctgctgtaaagttattgagggaggat
actcaagatgatcgaagacgcacatcagggttgttggttttgccattatactctggactt
tcacgtgttgatcaggatctggtatttgctcctactcccaagggaaagaggaaagttgtg
atatcaaccaatattgcagagacatcattgactttagagggtgttgtctacgttgtggat
agtggattctcaaagcagaggttttacaatccgatttctgacattgagagcttggtggtg
acaccaatatctaaggcttctgcaagacaaagggcagggcgagctggaagaatacaacca
gggaagtgctttaggttatatacagaagagtactttttgaaggaaatgcccacagaagga
attccagaaatgcaacgatcaaaccttgtctcgtgtgtgatacaattaaaggcattgggt
atagataatatattgggctttgattggctagcttctccaccaccagaggcaatggtgcga
gctcttgaagttctatactctcttggaattcttgatgaagatgccaaactcacgtcacct
attggttatcaggtggctgagattccactggaccctatgatctctaaaatgatcttgtca
gcatgtaactttggttgttctgaggagataatcactatagcagcagttctatctgttcag
tctatttgggtttctatgtggggagcacagaaggaatttgatgaagtgaagttacgtttt
gctgctgcagagggagatcatgttacatatcttaatgtctataaagggtttcttaactct
ggaaaatcttcacaatggtgttacaaaaattatctcaactatcaagctatgaagaaggtt
gtggatgtcagagaacaactcagccggttattgaggcgacttggtttagccctcaagtct
tgtgaaaaagacacacagattctaaggaaggccataattgctggattttttgcaaattca
tgccacttggaggaatatagttacaatggattgtacaagacagtcaggagttctgaagaa
gtatacattcatccttcttctgtactcttcagggttaacccaaagtgggtggtgtatcat
tccctcgtgtccactaacaagcattatatgcgcaatgtaattgctatagatccatcctgg
cttatcgaagctgcaccacatttctatcaggttcggacacctaatcttgccccttgctga
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